Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1073 |
Symbol | |
ID | 4241958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1683870 |
End bp | 1687463 |
Gene Length | 3594 bp |
Protein Length | 1197 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638106303 |
Product | methionine synthase (B12-dependent) |
Protein accession | YP_720915 |
Protein GI | 113474854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA GCCAGTTTTT AAACCGTCTC CATAGTCCAG AACGCCCAGT GATCGTCTTT GATGGTGCTA TGGGTACTAG CTTACAAGTC CAAAACCTAA CAGCAGAAGA CTTTGGCGGA AAAGAATATG AAGGTTGTAA TGAATATCTT GTCCATACTA AACCAGACGC AGTAGCCAAA GTTCATCGAG ATTTCTTAGC AGCAGGTGCG GATGTGATAG AAACTGATAC TTTTGGTGGG ACAAAAATTG TTTTAGCAGA ATATGACTTA GCAGACCAGG CTTATTATCT GAATAAAACA GCAGCGGAAT TAGCCAAGTC TGCTGCTGCT GAATATTCTA CCCCAGAAAA ACCTAGATTT GTGGCTGGTT CAATTGGACC AGGAACAAAA TTACCTACCC TCGGACATAT TGATTTTGCT ACCCTAAAAG ATAGTTTTAC TGAACAAGCT GAAGGTCTTT TTGATGGAGG AGTAGACTTA TTTCTTGTCG AAACTTGTCA GGATGTTTTG CAAATAAAAG CTGCTTTAAA TGGCATAGAA GAAATCTTTG CGAAAAAAGG CGATCGCCGA CCTATCATGG TATCAGTAAC AATGGAATCT TTTGGAACTA TGTTAGTCGG TTCAGAAATT AATGCTGCTC TGACAATTTT AGAACCTTAT TCTATTGATA TTCTGGGATT AAATTGCGCT ACAGGCCCAG ATTTAATGAA AGAACATATT CGTTATTTGT CAGAAAATTC GCCTTTTATT GTTTCGTGTA TTCCTAATGC TGGTTTGCCA GAAAATATTG GGGGACAAGC TCACTATAAA CTAACTCCTG TAGAGTTAAA AATGGCATTA ATGCACTTCG TTGAAGACTT AGGAGTCCAA GTCATCGGTG GTTGTTGTGG TACTCGCCCC GACCATATTA AAGCATTAGC TGAAATTACT GAAACCCTCA AACCAAAAGA ACGAAAACCT AACTATATTC CGGCAGCAGC TTCTATCTAT TCTTCAGAAA CTTATGAACA AGATAACTCA TTCTTAATTG TTGGTGAAAG ACTGAATGCT AGCGGTTCTA AAAAATGCCG AACTTTACTA AATGATGAAG ACTGGGATGG CTTAGTTGCC CTAGCAAAAT CTCAGGTAAA AGAAGGGGCA CAAATACTTG ATGTTAATGT TGATTATGTG GGACGTGATG GGGTGCGCGA TATGCACGAA TTAGCATCTC GCTTGGTCAC AAATGTTAAT TTGCCTCTGA TGTTAGATTC GACAGAATGG GAAAAAATGG AGGCTGGTTT AAAGGTTGCT GGTGGTAAAT GTTTGCTTAA TTCTACTAAC TATGAAGATG GAGAACCCCG TTTTTATCAA GTATTAGAAT TGGCGAAAAA ATATGGTGCT GGTGTAGTAG TTGGAACTAT TGATGAAGAT GGAATGGCTA GGACAGCTGA CAAAAAATTT GAAATAGCTA AACGAGCTTA TGATGCAGCA ATAGAATATG GCATTCCAGC CCGTGAATTG TTTTTTGATA CCCTAGCTTT GCCAATTTCT ACAGGTATTG AAGAGGATAG GGAGAATGGA AAAGCAACAA TTGAAGCTAT TAAACGGATC CGAGAAGAGT TGCCAGGCTG TCATATAATG CTCGGAGTTT CTAATGTTTC ATTTGGCTTA AACCCTGCAG CTAGACAAGT GTTGAACTCA GTGTTTTTGC ATGAATCAAT GGCAGTAGGG CTGGATGGTG CAATTGTTAG TGCAAATAAG ATTTTACCTT TAGCAAAAAT TGAACCAAAA CATCAAGATA TTTGTCGGAA ACTAATATAT GACCAACGTC AATTTGAAGG GGATATTTGT GTTTATGATC CTCTAACTGA ATTGACAAAA ATGTTTGAGG GTAAAACGAC TAAAAAAGAC CGTTCTGCTA CAGAAAATTT ACCAATTGAA GAACGTTTAA AACAACATAT TATTGATGGG GAACGTATTG GTTTAGAAGA TGCTTTGAGA AAAGCTTTAG AAACATATCC GCCACTAGAT ATTATCAATG TCTTCTTATT AAATGGCATG AAAGTAGTAG GAGAATTATT CGGTTCTGGA CAAATGCAAT TACCATTTGT ATTACAGTCT GCTCAAACTA TGAAAGCAGC TGTTGCTTAT CTACAACCTT ATATGGAAAA GGAAGAGTCA GGAGATAATT CTAAGGGAAC TTTCCTTATT GCTACTGTTA AGGGAGATGT GCATGATATT GGTAAAAATC TTGTGGATAT TATCTTGTCA AATAATGGTT ATCGGGTAAT TAACTTAGGA ATTAAACAGC CAGTTGATAA TATTATTACT GCTTATCGAG AACATAATGT TGACTGTATT GCTATGAGTG GTTTATTGGT GAAGTCAACT GCATTTATGA AAGATAATTT GGAAACATTT AATCAAGAAG GTATTACTGT TCCGGTGATT TTAGGTGGTG CAGCACTAAC TCCTAAGTTT GTCCATGAAG ATTGCCAAAA TACTTACAAA GGTAAGGTTG TTTATGGTAA AGATGCTTTT TCTGATTTGA ATTTCATGGA TAAGTTAATG CCAGCAAAAG CAGAAAAGCA GTGGGATGAT ATCCAAGGGT TTTTAAATGA GTTGGCGGAA GAAAATGGTA ATGGTAATGG TAATGGTAAT GGTAATGGTA ATGGTAATGG TAATGGTAAT GGTAAAGTTG CTACTTCAGT TAAGTCTGAA GATCAAGAGG AAAGTCAAAC TGCTGCTCCA GTAGATACTC GACGTTCTGA TGATGTGCCA GTTGATATTG AGCGCCCGAC TCCGCCTTTC TGGGGAACCA AGTTATTACA ACCAGAGGAT ATGCCATTTG AGGAATTATT CTGGTATTTA GATTTGCAAG CGTTGATAGC GGGGCAATGG CAATTCCGTA AACCTAAAGA CCAGTCGCGG GAAGAGTATG ATGAGTTTTT AGCTGAGAAA GTTTATCCTA TTCTGGAAAC CTGGAAGTCA CGGGTAATTA CAGAAAAGTT GCTACATCCC CAAGCAATTT ATGGTTATTT CCCTTGTCAA GCAGAAGGCA ATACACTTTT AATTTACGAC TCGGAGGAAA TGAGTCAGAC TGGAAAGGCA ACAAAAGTTG TCAACAGTTT TGAGTTTCCA CGGCAAAAGT CAGGGCGACG GTTGTGTATT ACTGACTTTT TTGCTCCTAA GGAGTCGGGA GTTATTGATG TGTTTCCGAT GCACGCTGTG ACAGTGGGAG AAATAGCGAC TGAGTTTGCT CAGAAATTGT TTGCAGATAA TCAATATACA GATTATTTGT ATTTCCACGG TATGGCGGTA CAAACTGCGG AAGCGATGGC GGAGTGGTTA CACGCTCGTA TTCGTCGGGA GTTGGGTTTT GGTAGTAAGG ATGCGGATAA TATTAAGGAT ATTCTGAGAC AGCGTTATCA AGGTTCACGT TATAGTTTTG GTTATCCTGC TTGTCCGAAT ATGCAGGATC AGTTTAAGCA GTTAGATTTG TTGGAGACTA AAAGAATTGA TATGTATATG GATGAGAGTG AGCAGTTGTA TCCTGAACAG TCTACGACGG CGATCGTTAC TTATCATTCT GCGGCGAAGT ATTTTAGTGC GTAG
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Protein sequence | MMNSQFLNRL HSPERPVIVF DGAMGTSLQV QNLTAEDFGG KEYEGCNEYL VHTKPDAVAK VHRDFLAAGA DVIETDTFGG TKIVLAEYDL ADQAYYLNKT AAELAKSAAA EYSTPEKPRF VAGSIGPGTK LPTLGHIDFA TLKDSFTEQA EGLFDGGVDL FLVETCQDVL QIKAALNGIE EIFAKKGDRR PIMVSVTMES FGTMLVGSEI NAALTILEPY SIDILGLNCA TGPDLMKEHI RYLSENSPFI VSCIPNAGLP ENIGGQAHYK LTPVELKMAL MHFVEDLGVQ VIGGCCGTRP DHIKALAEIT ETLKPKERKP NYIPAAASIY SSETYEQDNS FLIVGERLNA SGSKKCRTLL NDEDWDGLVA LAKSQVKEGA QILDVNVDYV GRDGVRDMHE LASRLVTNVN LPLMLDSTEW EKMEAGLKVA GGKCLLNSTN YEDGEPRFYQ VLELAKKYGA GVVVGTIDED GMARTADKKF EIAKRAYDAA IEYGIPAREL FFDTLALPIS TGIEEDRENG KATIEAIKRI REELPGCHIM LGVSNVSFGL NPAARQVLNS VFLHESMAVG LDGAIVSANK ILPLAKIEPK HQDICRKLIY DQRQFEGDIC VYDPLTELTK MFEGKTTKKD RSATENLPIE ERLKQHIIDG ERIGLEDALR KALETYPPLD IINVFLLNGM KVVGELFGSG QMQLPFVLQS AQTMKAAVAY LQPYMEKEES GDNSKGTFLI ATVKGDVHDI GKNLVDIILS NNGYRVINLG IKQPVDNIIT AYREHNVDCI AMSGLLVKST AFMKDNLETF NQEGITVPVI LGGAALTPKF VHEDCQNTYK GKVVYGKDAF SDLNFMDKLM PAKAEKQWDD IQGFLNELAE ENGNGNGNGN GNGNGNGNGN GKVATSVKSE DQEESQTAAP VDTRRSDDVP VDIERPTPPF WGTKLLQPED MPFEELFWYL DLQALIAGQW QFRKPKDQSR EEYDEFLAEK VYPILETWKS RVITEKLLHP QAIYGYFPCQ AEGNTLLIYD SEEMSQTGKA TKVVNSFEFP RQKSGRRLCI TDFFAPKESG VIDVFPMHAV TVGEIATEFA QKLFADNQYT DYLYFHGMAV QTAEAMAEWL HARIRRELGF GSKDADNIKD ILRQRYQGSR YSFGYPACPN MQDQFKQLDL LETKRIDMYM DESEQLYPEQ STTAIVTYHS AAKYFSA
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