Gene Tery_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1053 
Symbol 
ID4242016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1647640 
End bp1648356 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content29% 
IMG OID638106285 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_720897 
Protein GI113474836 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0259834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTA AACCATTAAT TATTGCTCAT CGCGGTGCAT CTGGCTTGGT AAAATTTGAA 
AATACTTTAG CATCTTTTGC TAAAGCTATT GAGTTAGGTG TTTCAATGGT AGAGTTTGAT
GTTAGAAAAA CTCAGGATAA TTTATTGGTT GCCTTTCATG ATGAATCAAT TGATGGGATA
AAACTTAGGG ATTTGACTTA TCAACAACTT TTAAATATTT CACAGAAAAA AGGTTTTGAT
GTGCCATTAG TAGAAGATGT ACTTAAGCTG TGTCAGAGGA AAATTAAACT TGATATTGAA
TTGAAAGAAG CCGGATATGA ATTGGAGATA GTTAATTTAG TTAAAAAATA TTTAGATTAT
CAAGATTATG TCATTAAATC TTTTATTGAT ACTGCGATTA TCACCCTTAA AAAAACTGAT
AACAAAATTA CAACTGGTCT ATTACTAGGA CTGGGGAATC CCCAAAATTT CATCCTTACT
CGATTATCAG AAATTTTTCC AGAATTTCGT TTACTTCTAA CTAAAGCTGA TTTTGTTTCT
CCTAATTATC AATTAATAAA ATTAGGTTTT GTGTGGCGGA TGAAAATTCT TAATAAGAAT
ATCTATGTTT GGACGATTAA TGATGAAAAA TTAATGTCTA AAATTATTAA GAAAGGAATA
TTTGCATTAA TTACAGACAG GCCAGATTTA GCTTTGAAGT TATTTGATAG TAATTAA
 
Protein sequence
MTTKPLIIAH RGASGLVKFE NTLASFAKAI ELGVSMVEFD VRKTQDNLLV AFHDESIDGI 
KLRDLTYQQL LNISQKKGFD VPLVEDVLKL CQRKIKLDIE LKEAGYELEI VNLVKKYLDY
QDYVIKSFID TAIITLKKTD NKITTGLLLG LGNPQNFILT RLSEIFPEFR LLLTKADFVS
PNYQLIKLGF VWRMKILNKN IYVWTINDEK LMSKIIKKGI FALITDRPDL ALKLFDSN