Gene Tery_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1003 
Symbol 
ID4245530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1567748 
End bp1568413 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content36% 
IMG OID638106242 
ProductNmrA-like 
Protein accessionYP_720854 
Protein GI113474793 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.95557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTATTCCTGG AGCAACTGGT CAAACAGGCC GTCGAATCGT ACAAGAGTTG 
GTAAGACGAG ATATTCCTGT TAAAGCTTTA GTTCGTAACT TAGAAATGGC TAGAGAAATT
CTGCCTCCAA AAGCAGAGCT AGTTATGGGG GATGTCCTTA ATCCTACTAG TCTTTATAAT
GCTATGGGGG ATAGCACAGT TGTATTATGT GCTACAGGTG CTAAACCTAA CTTTAATTTT
GCTGGTCCAT TAATGGTTGA TTATTTAGGA ACTAAAAATT TAGTAGATGT TTCAAAGCAG
AAGGGTATTA AACATTTTGT TTTAGTTTCA TCCCTCTGTG TGTCTAAGTT TTTTCACCCC
TTAAATTTGT TCTGGTTAGT TTTATTTTGG AAGAAACAAG CTGAAGAATA TATTAAGAAA
AGTGGTATTA ATTATACTAT TGTCCGCCCT GGTGGTTTGA AAAATGATGA CAATCAATTT
CCTATTGTGA TGGAACCTGC AGATCGCTTA TTTGAAGGTA GTATTCCTCG TACTAAAGTC
GCACAAGTTT CTGTAGAGGC TATTTTTCAA TCAGCAGCTT GTAATAAAAT TGTAGAGATT
GTTACTCAGG CAAAAGCGCC TGAAAAATCT TTGGTAGAAT TATTTAGTTC TCCCTCTTTG
CAGTAG
 
Protein sequence
MKAFIPGATG QTGRRIVQEL VRRDIPVKAL VRNLEMAREI LPPKAELVMG DVLNPTSLYN 
AMGDSTVVLC ATGAKPNFNF AGPLMVDYLG TKNLVDVSKQ KGIKHFVLVS SLCVSKFFHP
LNLFWLVLFW KKQAEEYIKK SGINYTIVRP GGLKNDDNQF PIVMEPADRL FEGSIPRTKV
AQVSVEAIFQ SAACNKIVEI VTQAKAPEKS LVELFSSPSL Q