Gene Tery_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0920 
Symbol 
ID4242885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1454098 
End bp1454445 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content32% 
IMG OID638106179 
Productanti-sigma-factor antagonist 
Protein accessionYP_720791 
Protein GI113474730 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.548618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC TTGTTATTAA ATATATTGAA CCCTCTGGTA TTATAGATAG TACTAAAACT 
ACTTCATTTC GCCAAGATAT TAGTGAACAA GTTAATGCTG GAGCTGATGT TGTTGTGATA
GATTTTAAAG AAGTAACTTT TATGGATAGT TCCGGTTTAG GTGCTTTAGT CATAGCACTT
AAGACTGTTC GTGCTGCTGG ACGTAAGTTA GTTATATGTT CTATTAATGA GCAAATTAAA
ATGCTTTTTG AACTAACTAG CATAGATCGA GTTTTTCGGA TATTTCCTAA CCGAGAAGAG
TTTAAAAAAG CTACTAATAT AAGTCTTCAA CCTCAAAGCA AATCCTAA
 
Protein sequence
MNNLVIKYIE PSGIIDSTKT TSFRQDISEQ VNAGADVVVI DFKEVTFMDS SGLGALVIAL 
KTVRAAGRKL VICSINEQIK MLFELTSIDR VFRIFPNREE FKKATNISLQ PQSKS