Gene Tery_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0832 
Symbol 
ID4243126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1320189 
End bp1322276 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content36% 
IMG OID638106107 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_720719 
Protein GI113474658 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTACG AACCTCTTCA TCATAAATAT CGTCCTCAAA CCTTTGCAGA CTTAGTGGGT 
CAAGATGTGA TTGCCCAAAC TCTCACTAAT GCCATCCATA CCAAACGCAT CGCCCCAGCA
TATCTATTTA CAGGACCTAG AGGCACAGGC AAAACCTCTA GTGCTCGGGT TTTGGCCAAA
TCTCTCAATT GTCTGTCCTA TGACCACCCT ACACCGAGTC CCTGTGGCAC TTGTAATGTT
TGTGTAGGAA TTACAAAAGG GTCAACACTG GACGTTATAG AAATTGATGC TGCTAGCAAT
ACTGGTGTGG ACAACATTAG GGAATTAATT GAAAGATCCC AGTTTGCACC TGTGCAGTGT
CGCTATAAAG TATATGTGAT AGATGAAGTC CACATGTTGT CTGTGTCTGC CTTCAATGCT
TTACTGAAAA CTTTGGAGGA ACCGCCAAAG GGAGTAGTAT TTATCCTGGC TACTACAGAT
CCACAGAGAG TCTTAGCAAC TATTATTTCC CGTTGCCAAC GTTTTGACTT TCGCCGAATT
CCTCTTGAAG CAATGGTCAA GCATTTACAT CATATTGCTA TTGAGGAAAA AATTGATATT
ACAACTGAAG CGATACAGAT GATAGCTCAA ATTGCTCAGG GTGGGTTAAG AGATGCAGAG
AGTTTGCTAG ATCAGTTGAG TTTGTTGGCA GGAGAAATTA CGGTTGAACG AGTTTGGGAT
CTGGTGGGGG CGGTGCCGGA ACGAGATTTA ATGGTACTGG TAGAAGCGAT CGCTGCGGAT
AATTCCATAA AAGTATTGAA GTGCACTCGC CAAATTATGG ATCGGGGTAA GGAACCAATT
ATTGTATTGC AAAATTTGGC AGGGTTTTAC CGAGATTTAT TGATAGCAAA AACAGCACCA
ACAAGTAAAA ATTTAGTAGC CTTGACAAAA CCTACTTGGG AAAAGCTTTG TCAATTTTCT
CAAGACTGGG ATATTGGAAC TATTTTAGCT GGTCAAAAGC ATTTACAAAC ATCGGAAGTA
CAAATTAAAA ATACTACTCA ACCTCGTTTA TGGTTGGAGG TAACTTTATT AGGGTTATTA
CCTTCTGCAT TACCGAAATT TAACCAGTTG GAAAAACAAG AAACTAGAGA TATAAGTCAG
AATGTTTCTG TTAAAAATAC TTCCAAAAAT TTATCACAAC CCCTGACAAA AAAACCGATT
TCTGAAAAAC CAAAACAGCA AATCTCAGAA CCAAAAGAAG TTTCTAAAGA AGTTCCTATT
GCTCCTAAAA GTGAAGATTT TTTTACTTCT TCAACTAATG ATACAGCAAA AAAATCTTCG
TCAGATTCAT TAGAAACTGA CAAGATTAAG AATGAATCAG AATTACAGAA TATTTGGGAA
AAAGTTCTAG CAGAAGTTAA ACCACACAGT ACACAAGCTT TATTAAGTCA ACAAGTCATA
TTATTAGGGT ATAATAATGA ACTGGCGCGT ATTGGTATTA GCTCTAAGAA TTTAGAGAAA
ATGGTTATTC ATAAAATTCC TAATATTGAA GCTGCGTTTG AGAAAATTTT TCAGACTTCG
GTAAAAGTAA AAGTAGAGGT AAAAAATTCT CAACAAAAAC AGCATAGTTT TCGTGAAAAT
ATTTATCCGA ATCATAGTCC AAGAGAAAGG CTAAACAGTA ATAATAAGCT AAGGCAAGAA
AACTCTAATT ATGATGATAA AATTGCCGAA GATGAACCAG AAAATTTCCC AGTTTCCTAT
CCGAGCAACT CCCAGAAAGA AAAGAAAACT ACCCCAAATT TTTCTCTGCC TAATTCACCT
TTGAATGATT TGGTAGAAAA GGAAAAATAT CCTGAAGGAA AAAGAGATTC TGTGGCGATC
GCTACTCGTC GGATAGTTAA TTTTTTTAAG GGAGAAATAG TAGATATAAA ATCAATTAAA
TTGCCAGATA AAATAGATCA AGCAGATAAA ACTGATTTAC CTGCAACATC TGAGTCTTCT
GATTTATCTA TTGATGTTCA GAGTCAAAAA TCTAAAAATA GCCATGTTGG TATAGATGAA
CCAGAAGAAA ATGAAGGGGA TAATTTTAAT GATGATATTA TATTTTAA
 
Protein sequence
MAYEPLHHKY RPQTFADLVG QDVIAQTLTN AIHTKRIAPA YLFTGPRGTG KTSSARVLAK 
SLNCLSYDHP TPSPCGTCNV CVGITKGSTL DVIEIDAASN TGVDNIRELI ERSQFAPVQC
RYKVYVIDEV HMLSVSAFNA LLKTLEEPPK GVVFILATTD PQRVLATIIS RCQRFDFRRI
PLEAMVKHLH HIAIEEKIDI TTEAIQMIAQ IAQGGLRDAE SLLDQLSLLA GEITVERVWD
LVGAVPERDL MVLVEAIAAD NSIKVLKCTR QIMDRGKEPI IVLQNLAGFY RDLLIAKTAP
TSKNLVALTK PTWEKLCQFS QDWDIGTILA GQKHLQTSEV QIKNTTQPRL WLEVTLLGLL
PSALPKFNQL EKQETRDISQ NVSVKNTSKN LSQPLTKKPI SEKPKQQISE PKEVSKEVPI
APKSEDFFTS STNDTAKKSS SDSLETDKIK NESELQNIWE KVLAEVKPHS TQALLSQQVI
LLGYNNELAR IGISSKNLEK MVIHKIPNIE AAFEKIFQTS VKVKVEVKNS QQKQHSFREN
IYPNHSPRER LNSNNKLRQE NSNYDDKIAE DEPENFPVSY PSNSQKEKKT TPNFSLPNSP
LNDLVEKEKY PEGKRDSVAI ATRRIVNFFK GEIVDIKSIK LPDKIDQADK TDLPATSESS
DLSIDVQSQK SKNSHVGIDE PEENEGDNFN DDIIF