Gene Tery_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0798 
Symbol 
ID4243209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1265648 
End bp1265992 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content34% 
IMG OID638106076 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_720688 
Protein GI113474627 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.941377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAT TAGGAATTAC TCAAAATATT GTTGCCATAG TTGCCGAAAA TGCTAACAAT 
AGATTGATAA AACGAGTCAC CCTAGAAATA GGTGAACTAT CTGCTATTAT GCCCAATGCT
ATTGAATTTT GTTTTGATGT TTGCACTCAA GGTACAGTAT TGGAAGGGGC AACTTTAGAA
ATTATCAAAA TTCCTGGTTT AGGAAAATGT CGTCAATGTG CAACAGAAAT TCCCCTAGAG
CAACCATTCG GCATTTGTCA TGTTTGTAAT AGTGTTGAAC TTGATATTAT TCAAGGTCAA
GAACTTAAAA TTAAGGAAAT GGAAGTAGAA GAATTATCTG TTTAA
 
Protein sequence
MHELGITQNI VAIVAENANN RLIKRVTLEI GELSAIMPNA IEFCFDVCTQ GTVLEGATLE 
IIKIPGLGKC RQCATEIPLE QPFGICHVCN SVELDIIQGQ ELKIKEMEVE ELSV