| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0784 |
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| Symbol | |
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| ID | 4243195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1251949 |
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| End bp | 1252959 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638106065 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_720677 |
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| Protein GI | 113474616 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.532885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGC TAAATCAAGA AAATAAAAAT CAAAAGAAAA CTCAAACTAA ATTTGGTCCT
ACTACTTACT CTTCAATGGA CACAGTTCGT ACCTACTTAC ATGAGATTGG TCGTGTACCA
CTTTTAACTC GTGAGGAAGA GATTGTTTAT GGTAAACAAG TGCAGCAAAT GATGCAATTC
CTAGAATTAA AAGAAAAATT AGAGGAAAAA CTTAATAGAA CAGCAACTTT ACTAGAATGG
GCAGAACATT TACTAGTAAG TGAAAAAGTA CTTAAGCAAG CAATTAAGCA AGGTCAACGT
GCCAAGCAAA AAATGATTGA AGCTAATCTT CGCTTAGTAG TAGCGATCGC TAAAAAGTAT
CAAAAGCGAA ATATGGAGTT CTTAGATTTA ATTCAAGAAG GTACTCTTGG TTTAGAAAGA
GGGGTGGAAA AATTTGATCC TACACGGGGA TACAAATTTT CTACTTATGC TTACTGGTGG
ATTCGTCAGG CAATTACTAG AGCGATCGCA CAACAAGCTC GTACTATTCG CCTACCTATT
CATATTACTG AAAAGCTCAA CAAAATCAAA AGAGTTCAGA GAGAACTAAT TCAGAGTTTG
GGTCGTAGTC CTACTCCTTC TGAGATTGCC CAAGCTTTAG AATTAGAACC TTCTCAGATT
AGAGAATATC TTTTGATGGC CCGTCATCCT ATTTCCTTAG ATTTAAGAGT TGGAGATAAT
CAGGATACTG AACTGCAAGA ACTTTTGGAG GATGAAACAT CTTCTCCGGA TGACTACATA
ACTGGTGAGT TATTGCGTCA AGATATAAAT ACCTTACTGG CAGAATTGAG TGAGCAACAA
CGTCGTGTAT TGGTATTGCG TTTTGGTCTT GAGGATGGTA AGGAGATGTC TTTAGCAAAA
GTGGGAGATA AACTTCAACT TAGTCGTGAG CGAGTTCGCC AACTAGAACA TCAAGCTTTG
GCCTTTTTAC GCCGTCGTCA GGCCAAGGTG CGGGAGTATG TAGCTAGCTA A
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| Protein sequence | MSKLNQENKN QKKTQTKFGP TTYSSMDTVR TYLHEIGRVP LLTREEEIVY GKQVQQMMQF
LELKEKLEEK LNRTATLLEW AEHLLVSEKV LKQAIKQGQR AKQKMIEANL RLVVAIAKKY
QKRNMEFLDL IQEGTLGLER GVEKFDPTRG YKFSTYAYWW IRQAITRAIA QQARTIRLPI
HITEKLNKIK RVQRELIQSL GRSPTPSEIA QALELEPSQI REYLLMARHP ISLDLRVGDN
QDTELQELLE DETSSPDDYI TGELLRQDIN TLLAELSEQQ RRVLVLRFGL EDGKEMSLAK
VGDKLQLSRE RVRQLEHQAL AFLRRRQAKV REYVAS
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