Gene Tery_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0666 
Symbol 
ID4242805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1094074 
End bp1096749 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content43% 
IMG OID638105965 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_720578 
Protein GI113474517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG ATGGGTGTAC TTTTCCAGAT GTCACTTTTA CTGTCCCAGA TGTCAATTTT 
ATGGCCCAAG TTTCTGTGGA ACCACTAGGG GCTATGGGGA TAATTGAAGA GGGGTGGAGT
GAGGTTCGGA ACAATTTAGC TGAGTTTGCT AGTTCTGAGA CTTTTGAGAG GGATATGTTG
AGTGTCTTTG GGGAGTCTAC AAATGTTGAT TTGGGAAGGA CTATTATTGA TGCTTTGGTA
AAGGGTGAGG ACTGGCCACA GATAAATGTT GTGCCAGCAG CACTGATGAA TGGTGCGGCA
GGAGGTTTTG ACCCTCTGAC TGGTGAGGTG TATTTAGGGG ATAGTTTGGT TGAGCCATTG
TCTGTTGTGG GGAGTGAAAC AAGGGAGTTT GATCTAGTTG GTGTACTTAC CGAGGAAATA
GCACACTCTA TTGAGTGGAA GTTAAATCTC ACAGATACTC CAGGAGATGA GGGGGAGTAT
TTGGCAGCGT TGGTGAATGG GGATGAGTTG AGCGAGGGGG AAATTGCTCG GTTGCGGGGT
GAGGATGATA GGAGGGAGAT TTTAAATGGA ACGGTTATAG TGGAGGCTAA TTCAGATTTG
ACTTTTGAGA CTCAAACTTT CCCAACGGGT GATCAACCTC TAGGGATGGC AGCAGCAGAT
TTTAATCAAG ATGGGTTTCA GGATATTGTA GTAGCAAACA TTGGAGTAGC AAATGGCATA
TCAATCTTTT TGGGTGATGG TAAAGGAGGA GTGTTAACTG CATTCTTATC TAAATTAGAA
GGTGTTGTGC CCGCTCTCGT TACAGTAGGA GATATGAACC GAGACGGCAA CCAGGATATC
GTGACGGCAA ATTTCAGGAA CGATAGCGTG ACAGTGTTGT TTGGAAATGG GAAAGGTCAG
TTTAGCAGTT CTAGCAATTT TGCTGTAGGC GATAATCCAT TAGAATTAGC GGTAGCAGAC
GTAAACCGAG ACGGCAACCT GGATGTCGTT ACCCCTAATT ATTACTCTAA CGATGTCTCT
GTATTGTTGG GCAATGGGGA TGGTACTTTT ATGAGCGCTA CGAATTTTAC AACAGGAGGC
TCTAAGCCTG AGGGCGTAGT TATTAAAGAT ATCAATGGAG ACCGCAACCC GGATATTATG
GTAAGTAATG TTGACTCTGC TACCGTTGCT GTCCTGCCAG GAAATGGAGA TGGTACTTTT
GGCTTGCCTA CTAGTTTTCC GGCAGGAGGA AAAGTTTATG GTATAACAGG GAAGGACTTG
AACCGAGATG GGAAACTCGA TCTTGTCTTA CCCACATTAG ATCCAGATGG TGTTTCGGTA
ATGTTGGGTA TAGGAAATGG ATTTTTTGCT TTTCCCACGA ACCTTCCAGT AGGTTCTCTA
CCAGAACATG TTGCCATTGA AGATTTGAAT GGCGATCGCC AACTTGATCT TGTTGTCATA
AACAGAGGGT CTGATAATAT CTCCGTATTA CTGGGAAAAG GGAAAGGACT TTTCGAGCCT
GCGATTAATT TTGGGGTGGG AGAAGGGCCC AATATCGTTG TAGTAGAAGA CTTTAATAAT
GATGGCAAAA AAGATATTGC TGTAACAAAC AGTGAAGCTG ATACCATCTC CATCTTAACT
AATACCAGCA AAATTGCAGT CGCCGACCCC AACATTACCA TCTCTGACAC CAGAATAACT
GAAGGCAACA AAGGCAGGAA AAATGCTAAA TTCACTGTCA CTCTCGACGA CGCAAGCAAT
AAAACAGTCA AAGTCAACTA CGCAACTGCT AATAGTAGCG CCAAAGCCGG AAAAGATTAC
CGGAAAACCA CTGGTACTCT CACATTCAAA CCTGGTCAAA CCCAAAAGAA AATCAATGTT
CCTATCTTCG GCGACACTAT AGTCGAAAAA AACGAAAAAT TTCAGCTCAA CCTCAGCAAA
CCCAAAAATG GGAAAATCAA AGATAAACGC GGCATTGCCA CCATCCGCAA CGACGATAAA
AATCAGCCCC TGCTATCTAT TGGCGACGCT CAAATAACTG AAGGGGACCA GGGCAAAAAA
CAACTAAAAT TCGATGTCAC CCTCAACACC AAAGTCAAGA AAAGAGTTGA AGTTAATTAC
GCCACCGCGG ACATGACTGC CAAAAAAGGT TCCGACTACC AACAAACCAA GGGCAAACTC
ATTTTCAAAC CTAACCAGAA GAAAAAGACT ATAACAGTTC CCATCCTGGG GGATACTCTC
AACGAAGACG ACGAGAAATT TAGAGTCAAC CTTAGCAGAC CTAAAAATGC TAAACTGAGA
GATAAACGTG GAGTTGGTCT TATTAAAGAT AATGATCGGG GTGGAGACCA ACCAGGAGAT
AGTTTTGAGA CAGCGATCAA CTTAGACATA CTCACAGGGG AACAGGTTGT GAGTGACACA
ATTGGTTTTA CTGAGGGAAT AAAGCGGGAT ACAAATGACT ATTTCCGTTT CCAAACAGAT
AAAGAAGGTA CTTTTGTGTT GGTTCTTGAT GATCTGTTAA AAAATGCTGA TGTTGATCTA
TATGGTAGTG AGCAAGAATT GATTAACCAG TCGAAAAATA AGGGTGTTAA GCCAGAAAGT
ATTAGTACCA TATTAGACCC AGACACTTAT TTTCTGCGGG TATATCCCCA AGGCAGCAGT
CGCACAAACT ACCGTCTCAG CGTTGATTTA TTGTAG
 
Protein sequence
MIDDGCTFPD VTFTVPDVNF MAQVSVEPLG AMGIIEEGWS EVRNNLAEFA SSETFERDML 
SVFGESTNVD LGRTIIDALV KGEDWPQINV VPAALMNGAA GGFDPLTGEV YLGDSLVEPL
SVVGSETREF DLVGVLTEEI AHSIEWKLNL TDTPGDEGEY LAALVNGDEL SEGEIARLRG
EDDRREILNG TVIVEANSDL TFETQTFPTG DQPLGMAAAD FNQDGFQDIV VANIGVANGI
SIFLGDGKGG VLTAFLSKLE GVVPALVTVG DMNRDGNQDI VTANFRNDSV TVLFGNGKGQ
FSSSSNFAVG DNPLELAVAD VNRDGNLDVV TPNYYSNDVS VLLGNGDGTF MSATNFTTGG
SKPEGVVIKD INGDRNPDIM VSNVDSATVA VLPGNGDGTF GLPTSFPAGG KVYGITGKDL
NRDGKLDLVL PTLDPDGVSV MLGIGNGFFA FPTNLPVGSL PEHVAIEDLN GDRQLDLVVI
NRGSDNISVL LGKGKGLFEP AINFGVGEGP NIVVVEDFNN DGKKDIAVTN SEADTISILT
NTSKIAVADP NITISDTRIT EGNKGRKNAK FTVTLDDASN KTVKVNYATA NSSAKAGKDY
RKTTGTLTFK PGQTQKKINV PIFGDTIVEK NEKFQLNLSK PKNGKIKDKR GIATIRNDDK
NQPLLSIGDA QITEGDQGKK QLKFDVTLNT KVKKRVEVNY ATADMTAKKG SDYQQTKGKL
IFKPNQKKKT ITVPILGDTL NEDDEKFRVN LSRPKNAKLR DKRGVGLIKD NDRGGDQPGD
SFETAINLDI LTGEQVVSDT IGFTEGIKRD TNDYFRFQTD KEGTFVLVLD DLLKNADVDL
YGSEQELINQ SKNKGVKPES ISTILDPDTY FLRVYPQGSS RTNYRLSVDL L