Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0660 |
Symbol | |
ID | 4243167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1076583 |
End bp | 1078646 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638105959 |
Product | NAD(P)H-quinone oxidoreductase subunit F |
Protein accession | YP_720572 |
Protein GI | 113474511 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACAC TTTATCAATA TGCCTGGCTA ATTCCAGTAC TGCCGCTACT GGGAGCAACC TTAGTTGGCT TTGGCCTAAT TTCCTATAGC CGAGCCACAA GTAATTTACG ACAGGGAGCC GCAATATTTA TTGTCTCTCT GTTGGGAACT GCAATGGTTT TATCCTTTGC ATTGCTCTGG AGCCAAATAA ATGGCCATGA AATCTATACC CAAATGTTTG AGTGGGCAGC AGCAGGTGAC TTCAAGCTCA GTATGGGCTA CACCATCGAT CACTTGACTG CCCTCATGTT AGTCATAGTC ACTACCGTTG CCTTCTTGGT AATGGTCTAC ACAGATGGCT ACATGGCTCA CGATCCTGGA TATGTACGCT TTTACGCTTA CTTGAGCTTA TTTAGCTCCT CAATGTTAGG TCTAGTAATT TCTCCAAACC TAGTCCAAAT TTATATTTTC TGGGAACTTG TTGGTGTATC CTCATACCTA CTAATTGGTT TCTGGTACGA CCGTAAAGCA GCAGCAGAAG CCTGTCAAAA AGCTTTTGTT GTCAACCGTG TCGGTGACTT TGGTTTACTC CTGGGAATGC TAGGAATTTA CTGGGCCACT GGTACCTTTG AATTTGAGGC TATGGGTCTT CGCTTGGAGC AACTAGTAGA AACAGGAGCC CTAAGCATTG GTTTAGCTAC CCTTTTCGGT GTCTTAGTTT TCCTAGGACC TGTAGCTAAG TCAGCCCAAT TCCCACTGCA TGTTTGGTTG CCCGACGCAA TGGAAGGCCC GACTCCAATT TCTGCCCTGA TCCACGCAGC AACGATGGTA GCTGCTGGAG TATTCCTAAT TGCCCGGATG TATCCAGTAT TTGAACATCT GCCAGTGGTA ATGGATATTA TCGCTTGGAC GGGAGCCTTT ACAGCTTTTC TGGGGGCAAC GATCGCTATT ACTCAAAATG ATATTAAAAA AGGTCTGGCC TATTCGACTA TTTCCCAGTT GGGCTACATG GTAATGGCAA TGGGTGTGGG TGCTTATAGC GCTGGACTAT TTCACCTAAT GACCCATGCT TATTTCAAAG CTATGCTGTT CCTCTGTTCT GGTTCTGTAA TTCATGGAAT GGAGGCAGTG GTTGGCCATA ATCCAGTTTT GGCTCAAGAT ATGCGGTTAA TGGGTGGACT CAGGAAATAT ATGCCTATTA CCTCTACTTG CTTTTTAATT GGTACTGTGG CAATTTGTGG TATCCCTCCC TTTGCAGGTT TTTGGTCAAA AGATGAAATT TTAGGCAGTG CCTTTGGAGC AAACCCAGCT TTATGGTTCA TTGGTTGGGC AACTGCTGGC ATGACTGCTT TTTATATGTT CCGTATGTAT TTCTCTACTT TTGAAGGAGA ATTTAGGGGT AATAACACAA AAATTAAGGA TCAATTATTG CTGGCAAATG CTGCACCCCT GATGGAACTT AGCCCTGGGG CTATAGCTCC CAAAGAGTTG GAAAATGGCC ATGATAGCCA TGACCACGAC CATGATCATA GCCACTCTCC CCATGAGTCT CCTGTGAGCA TGACTCTACC ATTAATGGTT TTGGCAATTC CTTCGATGGT TATTGGTTTA TTGGGAACAC CTTTTGCTAA TTATTTTGAA CAGTTTATTT ATGCTCCTGG AGAGTCTTTG GCACAAGTCC TGGAGGAGTT GGCAGAGTTT GAGCTTAATG AATTTTTGAT TATGGCGGGT AACTCTGTTG GTATTGCTTT AATTGGTATT ACCTTTGCTT CACTTATGTA TTTGAGTCAT AAAATTGACC CAGATGCGAT CGCTAAAAAA ATCCCATCTC TCTACAACTT TTCCCTCAAC AAATGGTATC TAGATAATAT CAACGATTTT CTATTTGTTA AAGGTAGTCG TCGTCTAGCA CGGCAAGTTT TGGAAGTGGA CTACAAGATA GTTGATGGAG CTGTTAACTT GACAGGCTTT ATTACCCTAT TGAGTGGGGA AGGTTTGAAG TATTTAGAAA ATGGTCGAGC TCAGTTTTAT GCCTTAATTG TATTTGTGGC AGTTTTGGGC TTCGTTGTTT TCTCTGGTGC CTAG
|
Protein sequence | METLYQYAWL IPVLPLLGAT LVGFGLISYS RATSNLRQGA AIFIVSLLGT AMVLSFALLW SQINGHEIYT QMFEWAAAGD FKLSMGYTID HLTALMLVIV TTVAFLVMVY TDGYMAHDPG YVRFYAYLSL FSSSMLGLVI SPNLVQIYIF WELVGVSSYL LIGFWYDRKA AAEACQKAFV VNRVGDFGLL LGMLGIYWAT GTFEFEAMGL RLEQLVETGA LSIGLATLFG VLVFLGPVAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLIARM YPVFEHLPVV MDIIAWTGAF TAFLGATIAI TQNDIKKGLA YSTISQLGYM VMAMGVGAYS AGLFHLMTHA YFKAMLFLCS GSVIHGMEAV VGHNPVLAQD MRLMGGLRKY MPITSTCFLI GTVAICGIPP FAGFWSKDEI LGSAFGANPA LWFIGWATAG MTAFYMFRMY FSTFEGEFRG NNTKIKDQLL LANAAPLMEL SPGAIAPKEL ENGHDSHDHD HDHSHSPHES PVSMTLPLMV LAIPSMVIGL LGTPFANYFE QFIYAPGESL AQVLEELAEF ELNEFLIMAG NSVGIALIGI TFASLMYLSH KIDPDAIAKK IPSLYNFSLN KWYLDNINDF LFVKGSRRLA RQVLEVDYKI VDGAVNLTGF ITLLSGEGLK YLENGRAQFY ALIVFVAVLG FVVFSGA
|
| |