Gene Tery_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0627 
Symbol 
ID4242765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1027704 
End bp1029122 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content33% 
IMG OID638105929 
ProductResB-like 
Protein accessionYP_720542 
Protein GI113474481 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1333] ResB protein required for cytochrome c biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.305133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00211831 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATGTTG AAGATTCAGA TAAAAATTCT CTGATAAATC CTTTAAGAAT ATTTAAACGA 
GAAATATTGC CATTATTAGC TGATTTACGC TTGGCGATCG CTCTACTTTT AATAATAGCT
ATCTGTAGTA TTTCAGGCAC AGTTATAGAA CAAGGTGAGT CAATAGCTTT TTATCAAGAA
AACTATCCAG AAAAACCAGC ATTATTTGGT TTTTTAACCT GGAAAGTAAT TTTATTATTA
GAATTAGATC ATGTTTACCG GACTTGGTGG TTTTTATCAA TATTAATATT ATTCGGAGCT
AGTTTAACTG CCTGCACATT TACTAGACAA TTACCAGCCC TAAAATCTGC GAACCGCTGG
AAATTTTATA ATAAAAAACA ACAATTTAAA AACTTAGCAT TAAGTGCAGA AATAGAAACA
GCTTCTCTAG ATTCTTTAGA AGAAATATTA CAGAAAAGGG GCTATAAAAC TTCTAAAGAA
GGAGATAAAC TTTATGGAAG AAAAGGAATT ATTGGCAAAG TTGGTCCCAT AATAGTTCAC
GCTAGTATGC TAATAATTTT AGCAGGTTCA ATAATCGGCT CAATGACTGG ATTTCTTGGT
CAAGAAATAG TGCCGAGTGG GGAAACATTT CAAGTAAAAA ATATTATTGA TGCGGGAATT
TTTGCTAAGT CACAAATTCC TAAAAATTGG TCAGTTCGAG TCAATCGTTT CTGGATTGAT
TATACTCCTT CTGGAGGAAT TGACCAGTTT TATTCTGACT TATCAATATT AGATAAAAGT
GGAGAAGAAG TAGATAGGAA AACCATATTT GTTAATCAAC CTATGCGTTA TCATGGGGTG
ACAATGTATC AAGCAGATTG GGCGATCGCT GCAGTTAAAG TTAGGGTTAA TAAAAGTCCT
GTTTTTCGGT TACCAATGGC ACAATTAAAT ACAGAAGGAG GGGGTAAAAT TTGGGGTACT
TGGGTTCCTA TAAAACCAGA TTTAAGTGAA GGTGTATCTT TACTTGCCAA AGATTTACAA
GGAAATGTAT TAGTTTATGA TACTTCTGGT AAGTTAGTTG CTAGTGTGCG GGAAGGAATG
TTTATAGAGG TGAGTGGTGT CACTCTATTT ATTGACAAAA TTATAGGTAG TACAGGCTTA
CAAATTAAAG CTGACCCTGG TATTCCAATT GTTTATTTAG GTTTTGGTTT ATTAATGTTG
AGTGTATTAA TGAGTTATGT TTCTCACTCT CAAATTTGGG CTTTTCAAGA GAGTGAGCGA
CTTTATATAG GGGGTAAAAC TAATCGTGCT AATGTGACAT TTGAACGGGA AATATTAGAT
ATTTTAGATA GATTAGGAAG TGATGAAAAT ATATCTCTTG AAAAGCAAAA GCAACTTTTC
TCAGATTTTA GTGAGGGTAT TAAAACAAGT GAGAATTGA
 
Protein sequence
MDVEDSDKNS LINPLRIFKR EILPLLADLR LAIALLLIIA ICSISGTVIE QGESIAFYQE 
NYPEKPALFG FLTWKVILLL ELDHVYRTWW FLSILILFGA SLTACTFTRQ LPALKSANRW
KFYNKKQQFK NLALSAEIET ASLDSLEEIL QKRGYKTSKE GDKLYGRKGI IGKVGPIIVH
ASMLIILAGS IIGSMTGFLG QEIVPSGETF QVKNIIDAGI FAKSQIPKNW SVRVNRFWID
YTPSGGIDQF YSDLSILDKS GEEVDRKTIF VNQPMRYHGV TMYQADWAIA AVKVRVNKSP
VFRLPMAQLN TEGGGKIWGT WVPIKPDLSE GVSLLAKDLQ GNVLVYDTSG KLVASVREGM
FIEVSGVTLF IDKIIGSTGL QIKADPGIPI VYLGFGLLML SVLMSYVSHS QIWAFQESER
LYIGGKTNRA NVTFEREILD ILDRLGSDEN ISLEKQKQLF SDFSEGIKTS EN