Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0588 |
Symbol | |
ID | 4242745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 944659 |
End bp | 945549 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105892 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_720505 |
Protein GI | 113474444 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.144122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAAACT TTGGTAGTGT TCTGACTGCA ATGATTACAC CGTTTAATCT AGACGGTAGT GTTAACTATG AAGAAACAGA AAAGTTATCA ATATGGTTGA CAGAAAATGG AACAGACTCA TTAGTGGTAT GTGGAACAAC AGGTGAGTCT CCGAGTCTGA CATGGGAAGA AGAATATGAG TTATTTCAAG TAGTTCAAAA AGCAGTGGGA GGAAAAGCTA AAGTTATAGC AGGTACTGGG TCAAATTCAA CAAAAGAGGC GATCACAGCT ACTGAAAAAG CAGCTAAATT GGGTTTAGGA GGTTCATTAC AGGTGGTACC ATATTACAAT AAACCACCAC AGTCAGGACT TTATCGGCAT TTTCAAGCGA TCGCTCAAGC CACGCCAGAT TTCCCAATCA TAATATATAA TATACCAGGG CGTACAGGTA AAAACATGGA GCCAGAAACT GTAGCTAGAC TGGCGGAAAT TCCAAATATT GTCGCTATTA AAGAAGCAAG TGGCAACTTA GACCAAGTAA GTCAGATTAG AAACTTGACG GCACCAGAGT TTAAGATTTA TTCTGGAGAT GACTACCTAA CTCTACCATT AATGGCTATA GGTGGCAATG GGGTTGTTAG TGTAGCTAGT CACCTGGTAG GAAATAAACT ACAGGAGATG ATAGTAGCGT TTAAAACAGG TGAAGTACAG CGTGCGACAA AAATTCATTT AGAACTATTC AATTTATCTA GAACTCTATT TGCCACAACT AATCCCATTC CTATAAAGGA AGCTATGAAT ATGTTGGGAT GGAATGTAGG TAAGACTCGC CTTCCATTAT GCGATCCACC AGCAGAGATT ACTGAAAAAT TAAGGGTAGA AATGGATAAA TTAGGTCTAT TAGCCAGATA G
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Protein sequence | MVNFGSVLTA MITPFNLDGS VNYEETEKLS IWLTENGTDS LVVCGTTGES PSLTWEEEYE LFQVVQKAVG GKAKVIAGTG SNSTKEAITA TEKAAKLGLG GSLQVVPYYN KPPQSGLYRH FQAIAQATPD FPIIIYNIPG RTGKNMEPET VARLAEIPNI VAIKEASGNL DQVSQIRNLT APEFKIYSGD DYLTLPLMAI GGNGVVSVAS HLVGNKLQEM IVAFKTGEVQ RATKIHLELF NLSRTLFATT NPIPIKEAMN MLGWNVGKTR LPLCDPPAEI TEKLRVEMDK LGLLAR
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