| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0587 |
|---|
| Symbol | |
|---|
| ID | 4244613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 943156 |
|---|
| End bp | 944193 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638105891 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_720504 |
|---|
| Protein GI | 113474443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGATT CATACAGAGT AGCAATATTA GGAGCAACTG GTGCAGTAGG TACGGAATTA
CTAGAATTAC TGGAAACTCG GAACTTTCCA GTAGGAGAAT TAAAACTCTT AGCTTCAGAA
TTTTCAGCGG GTAAGACCTT AAAATTTAAG GAACAAAGTT TACAAGTAGA AGCTGTAACA
AATGATTCAT TTAATAAAGT AGATTTAGTG CTAGCATCAG CAGGTGCATC TGTATCAAAA
GTATGGGCAA AGAAAGCAGT AGAGGCTGGA GCTGTAGTTA TTGACAATTC TAGTGCTTTT
CGTATGGACT CCCAAGTACC TCTTGTAGTC CCAGAAGTTA ACCCAGAAGC AGCGGCTTTA
CATAAAGGTA TAGTTGCTAA CCCTAACTGC ACAACAATAT TAATGAGTGT AGCAGTGTGG
CCATTGCACA AAATCCAGCC AGTCCAAAGG TTAGTAGTGG CCACTTATCA ATCAGCAAGT
GGGGCCGGGT CAAGGGCTAT GGCAGAAATG AAAATTCAGG CCCAAGAAAT CTTAGATGGA
AAAACTCCAA CAACAGATAT TTTTCCCTAC CCATTAGCAT TTAATTTGTT CCCTCATAAT
TCTCAACTCA ATGAGCAGGG ATATTGTCAA GAAGAAATGA AAATGCTTGA TGAAACCAGA
AAAATATTTG GCTCTAAGGA ACTGAGAATT ACAGCAACTT GTATTCGAGT ACCAGTATTA
AGAGCTCATT CAGAAGCAAT TAATTTGGAA TTTGCTGAAC CATTTAGTGT AGTTAAAGCA
CGGGAAGTAT TAAGTCAAGC ACCAGGAGTG ACACTGGTAG AAAATTGGCA AGAAAATTAT
TTTCCTATGC CTATGGTTGC AAGTGGTAAA GATGATGTAT TGGTGGGGAG AATTCGTCAG
GATATTTCTC AAGCTGAGGG GTTAGAATTA TGGTTAAGTG GAGACCAGGT AAGAAAAGGA
GCTGCCTTGA ATGCAGTACA AATAGCTGAA TTATTGGTGG CAAAAAATTG GCTGAGAATA
CCAGTAGGAA CATTTTAA
|
|---|
| Protein sequence | MSDSYRVAIL GATGAVGTEL LELLETRNFP VGELKLLASE FSAGKTLKFK EQSLQVEAVT
NDSFNKVDLV LASAGASVSK VWAKKAVEAG AVVIDNSSAF RMDSQVPLVV PEVNPEAAAL
HKGIVANPNC TTILMSVAVW PLHKIQPVQR LVVATYQSAS GAGSRAMAEM KIQAQEILDG
KTPTTDIFPY PLAFNLFPHN SQLNEQGYCQ EEMKMLDETR KIFGSKELRI TATCIRVPVL
RAHSEAINLE FAEPFSVVKA REVLSQAPGV TLVENWQENY FPMPMVASGK DDVLVGRIRQ
DISQAEGLEL WLSGDQVRKG AALNAVQIAE LLVAKNWLRI PVGTF
|
|---|
| |