Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0536 |
Symbol | |
ID | 4244504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 849080 |
End bp | 850216 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105847 |
Product | hypothetical protein |
Protein accession | YP_720461 |
Protein GI | 113474400 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0623826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00686318 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTTATC CCAAAAAATT ACCCAGTTCT ATACGCTACT TCCGAGCCAG ATTTAGTCAT TTGACAAAGG TCTCAGTTTG GGGACCAATT GGTGTAGTTT CTCTAGTGCT CTTATTTGTT TGGGAATTAT CAATGCATCC AGAATGGTTA ACCCTTGAAA ATGATGATAA TTCAGTATCA AACGGCAATA CAATCAGCGA AAATTTATCT GCTGAAGAAA TTTCTATTAT AAGTGATATT GACAATTCAT CAGTTTTAAT TGAAGAGTTA AAAAGTAATA AAAAACTGCT AATTAATCCT ATATTAAGTA ATCAGAAAAA TTCATTATAT CTACCCCAAA AATACAAGCA GAAAAATGTT ATAAACCAAG AACGAGATTT AGTTGACTCT ATGCCAGAAA TTAATATTTA CGAAGAAGGG AAAACTAAGA ATTTTTATTC TATAAATCAA CTACAAAATA GCAATTTATC TACTTCTCCT CTATTACGCA GTATGAATTT ATTAGATCAA GCAAACCAGG AGGAAACTAG AGTTGAACCT GTCTATCCTC TAAAGAATGC TATGGATAAT TATTTGAGTT CCAAAGGTAA ATCTGAATCT CCCTCCAATT ATAACTCTCA AAGCAGTAAC TTTAACCTTT ACCCAACTGA GATAAAGCCA AGAGATATTA CATCTTCTCC TATCATTAAT AGCTCAAAAT CTAATCTTTC TAAATCTGAG GAAGGAAACA ATTATAATCC GCCTTTACCT TCCATTAATG TGACTCCTCC AAAGCCTTAC TATACTAACT TATCAGGAGT AAGGAACCAG ACAAATAAGC CAACTAATTT ACCAGGGTAT AATTATTCTC TTGTAGGACC ACCTACTGCT CCAAATCTGC CTCCATTAAC TCCAGTAGTA CCATTAGGAT TAGCTAATAA TAAAAATGGG GTAGATGTAG TTAAGAATTT GGAATTTCCT GACTCTTATA ATAATCAAGG ATATCGGCAA AATCAGCCAC AATATTACTA TCAAGTGAAT CCTAATCAGA ATCAAAATGT ACTAGCAACT CCTTCAAGTA ATCCTTTTTC TAGTAGAAAT AATAGTTTTT ATAATTCTGG GTATAATCAA CGTTGGAATA ATCCTTTTAG AGAATAG
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Protein sequence | MPYPKKLPSS IRYFRARFSH LTKVSVWGPI GVVSLVLLFV WELSMHPEWL TLENDDNSVS NGNTISENLS AEEISIISDI DNSSVLIEEL KSNKKLLINP ILSNQKNSLY LPQKYKQKNV INQERDLVDS MPEINIYEEG KTKNFYSINQ LQNSNLSTSP LLRSMNLLDQ ANQEETRVEP VYPLKNAMDN YLSSKGKSES PSNYNSQSSN FNLYPTEIKP RDITSSPIIN SSKSNLSKSE EGNNYNPPLP SINVTPPKPY YTNLSGVRNQ TNKPTNLPGY NYSLVGPPTA PNLPPLTPVV PLGLANNKNG VDVVKNLEFP DSYNNQGYRQ NQPQYYYQVN PNQNQNVLAT PSSNPFSSRN NSFYNSGYNQ RWNNPFRE
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