Gene Tery_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0536 
Symbol 
ID4244504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp849080 
End bp850216 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content32% 
IMG OID638105847 
Producthypothetical protein 
Protein accessionYP_720461 
Protein GI113474400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0623826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00686318 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTTATC CCAAAAAATT ACCCAGTTCT ATACGCTACT TCCGAGCCAG ATTTAGTCAT 
TTGACAAAGG TCTCAGTTTG GGGACCAATT GGTGTAGTTT CTCTAGTGCT CTTATTTGTT
TGGGAATTAT CAATGCATCC AGAATGGTTA ACCCTTGAAA ATGATGATAA TTCAGTATCA
AACGGCAATA CAATCAGCGA AAATTTATCT GCTGAAGAAA TTTCTATTAT AAGTGATATT
GACAATTCAT CAGTTTTAAT TGAAGAGTTA AAAAGTAATA AAAAACTGCT AATTAATCCT
ATATTAAGTA ATCAGAAAAA TTCATTATAT CTACCCCAAA AATACAAGCA GAAAAATGTT
ATAAACCAAG AACGAGATTT AGTTGACTCT ATGCCAGAAA TTAATATTTA CGAAGAAGGG
AAAACTAAGA ATTTTTATTC TATAAATCAA CTACAAAATA GCAATTTATC TACTTCTCCT
CTATTACGCA GTATGAATTT ATTAGATCAA GCAAACCAGG AGGAAACTAG AGTTGAACCT
GTCTATCCTC TAAAGAATGC TATGGATAAT TATTTGAGTT CCAAAGGTAA ATCTGAATCT
CCCTCCAATT ATAACTCTCA AAGCAGTAAC TTTAACCTTT ACCCAACTGA GATAAAGCCA
AGAGATATTA CATCTTCTCC TATCATTAAT AGCTCAAAAT CTAATCTTTC TAAATCTGAG
GAAGGAAACA ATTATAATCC GCCTTTACCT TCCATTAATG TGACTCCTCC AAAGCCTTAC
TATACTAACT TATCAGGAGT AAGGAACCAG ACAAATAAGC CAACTAATTT ACCAGGGTAT
AATTATTCTC TTGTAGGACC ACCTACTGCT CCAAATCTGC CTCCATTAAC TCCAGTAGTA
CCATTAGGAT TAGCTAATAA TAAAAATGGG GTAGATGTAG TTAAGAATTT GGAATTTCCT
GACTCTTATA ATAATCAAGG ATATCGGCAA AATCAGCCAC AATATTACTA TCAAGTGAAT
CCTAATCAGA ATCAAAATGT ACTAGCAACT CCTTCAAGTA ATCCTTTTTC TAGTAGAAAT
AATAGTTTTT ATAATTCTGG GTATAATCAA CGTTGGAATA ATCCTTTTAG AGAATAG
 
Protein sequence
MPYPKKLPSS IRYFRARFSH LTKVSVWGPI GVVSLVLLFV WELSMHPEWL TLENDDNSVS 
NGNTISENLS AEEISIISDI DNSSVLIEEL KSNKKLLINP ILSNQKNSLY LPQKYKQKNV
INQERDLVDS MPEINIYEEG KTKNFYSINQ LQNSNLSTSP LLRSMNLLDQ ANQEETRVEP
VYPLKNAMDN YLSSKGKSES PSNYNSQSSN FNLYPTEIKP RDITSSPIIN SSKSNLSKSE
EGNNYNPPLP SINVTPPKPY YTNLSGVRNQ TNKPTNLPGY NYSLVGPPTA PNLPPLTPVV
PLGLANNKNG VDVVKNLEFP DSYNNQGYRQ NQPQYYYQVN PNQNQNVLAT PSSNPFSSRN
NSFYNSGYNQ RWNNPFRE