| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0460 |
|---|
| Symbol | |
|---|
| ID | 4243754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 729656 |
|---|
| End bp | 731518 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638105777 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_720391 |
|---|
| Protein GI | 113474330 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[S] Function unknown
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCTG GAACCACTTT GAGAAACCAT TATAAAATCA TCAAACCCTT GGGTAGTGGA
GGTTTTGGGG ATACCTATTT GGCCCAAGAT TCAGATTTAC CAGGAAAACC TAAATGTGTG
GTTAAACATT TATCTCCGAA AAGCTCAGAC CCTATAGTTC TAAATATTGC TAGAAAATTA
TTTGAAAGAG AAGCGGAGAC TTTATACAAG TTAGGTAGTG ACTCAGACCA AATACCTAGA
TTATTGGCCC ATTTTCAAGA AGAAAAAGAA TTTTACTTAG TACAAGAATA TATAGAAGGG
CAAGACATAA GTCGAGAACT GACGCCGGGG AAAAAATTAA GTGAGTCGGA TACGATCGCT
TTATTGAAAG GAATATTAGA AGCATTAGTG GTGGCTCATG AAAATAATAT AATTCATCGA
GATATAAAAC CCCAAAATTT GATGCGTCGC GGCTCAGACA ATAAAGTGAT ATTGATAGAC
TTTGGGGCGG TAAAGGAAAT AAGCACACTG ACTATTACCC AACAAGGTGC AACAACTTTA
ACAGTTGCAG TGGGAACTCC TGGTTATATC CCGAGTGAAC AAAGTAACGG TAAGCCGAAG
TTAAGTAGCG ATATATATGC AGTGGGGATG GTGGGAATAA AAGCACTGAC GGGAAAAGAC
CCACAAAGTT TACCAACAGA CCCAAAAACA GGAAATATAA TTTGGCGAAA TAAAGCGGAG
GTAAGTAACG ACCTGGCAAA TGTATTAGAT AAGATGGTGC GGGAGTATTT TTCAGAACGT
TATCAAAATG CGATGGAAGC TATGGAAGCA TTAAATGTTC AAACTTCAGG AAAACTAAGG
TTAGGTAATA AAACGAGAAG AAAAATATTG ATATTAGTGG GTTTAGCCGG AAGTGGGTTT
GTGGGAGCAT TATTAAATGA AAAATTGAAA CCATCTCCAG AAAATATTTC TAGTTCTGAC
CTGAGAAAAG AAACTCCTAG GGAAAATATT TCAACACCCC AGCCGACACC ATCACCAACT
CCTCCACCAC CACCAAAAAT TCCCGTTCAG CTATTTACTA CGGTGAAAGT TAACCGCAGA
GGAGAAATAA TAAGCCGCGC TCCAGGTGAA GCAGAAGTAA TAACAGAAAA TATTGGTAAT
GGAGTTTCTC TAGAAATGGT AAAAATTCCC GGAGGTAGGT TTTTGATGGG GTCTCCAGAG
ACGGAAGCAG AAAGAAAGAA TGATGAAGGT CCCCAACATT ATGTAGATGT GCCAGAATTT
TTGATGGGAA AGTATGCAGT TACTCAAGCA CAGTGGGAAG CAGTTATGGG AAATAACCCT
GCTAGGTTTA AAGGTGCAAA CCGTCCTGTG GAAAAAGTAA GTTGGAATGA TGCGACAGAA
TTTTGTCGGA AACTCTCACG AATAACAGGA AAACAATATA GTCTACCCAG TGAGAGCCAA
TGGGAATATG CTTGTCGAGC CCGAACAACA ACACCATTTT ATTTTGGAGA AACTATAACC
TCTGAGTTAG TTAACTACAA TGGCAACTAT ACTTATGCTG ATGCTCCGAA AGGAAAATAT
CGAAAAGAAA CAACAGATGT GGGAATTTTT CCACCGAATG CATTTGGTTT GTACGATATG
CATGGGAATG TGTACGAGTG GTGTCAGGAT GTTGGGCATG AAAACTATAA TGGAGCACCT
ACTGATGGCA GTGCCTGGGA AACTGGAGGT GATAGTAGTA GCAGAGTCTG TCGTGGCGGC
TCCTGGGACT ACTTTCCTAG GAGGTGTCGC TCTGCGGACC GCGACAGCTA TCTCTCGGGC
GAGGCGGACA ACTACTCTGT TGGTTTTCGT CTTGTGAGTT TCCCCCCCAG GACTTTTGAA
TAG
|
|---|
| Protein sequence | MQSGTTLRNH YKIIKPLGSG GFGDTYLAQD SDLPGKPKCV VKHLSPKSSD PIVLNIARKL
FEREAETLYK LGSDSDQIPR LLAHFQEEKE FYLVQEYIEG QDISRELTPG KKLSESDTIA
LLKGILEALV VAHENNIIHR DIKPQNLMRR GSDNKVILID FGAVKEISTL TITQQGATTL
TVAVGTPGYI PSEQSNGKPK LSSDIYAVGM VGIKALTGKD PQSLPTDPKT GNIIWRNKAE
VSNDLANVLD KMVREYFSER YQNAMEAMEA LNVQTSGKLR LGNKTRRKIL ILVGLAGSGF
VGALLNEKLK PSPENISSSD LRKETPRENI STPQPTPSPT PPPPPKIPVQ LFTTVKVNRR
GEIISRAPGE AEVITENIGN GVSLEMVKIP GGRFLMGSPE TEAERKNDEG PQHYVDVPEF
LMGKYAVTQA QWEAVMGNNP ARFKGANRPV EKVSWNDATE FCRKLSRITG KQYSLPSESQ
WEYACRARTT TPFYFGETIT SELVNYNGNY TYADAPKGKY RKETTDVGIF PPNAFGLYDM
HGNVYEWCQD VGHENYNGAP TDGSAWETGG DSSSRVCRGG SWDYFPRRCR SADRDSYLSG
EADNYSVGFR LVSFPPRTFE
|
|---|
| |