Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0459 |
Symbol | |
ID | 4243753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 727178 |
End bp | 728614 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105776 |
Product | PUCC protein |
Protein accession | YP_720390 |
Protein GI | 113474329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.222585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGTA AAGATTTAAA AGGTACAAAA ATCGATAATA TTGATATGGA AAAAAATTTT CCTAAACTTA ATTTATTCAC TATGTTTAGA TTGGGTTTCT ATCAAATGGG ATTAGGAACA ATGTCAGTTT TAACTCTTGG AGTTTTAAAC CGAGTTATGA TTGCTGAATT AAAAATTCCT GCCACAATAG TAGCCATAAC TTTATCGTTA TATCAATTTA TGGCTCCAGC AAGGGTTTGG TTTGGTCAAA TGTCTGATAC TAAGCCTTTG CTTGGTAAAC ATCGCACTGG TTATATGTGG ATAGGAGCGG TTTTTTTTAC GGTAACTGCT TTTTTTGCTG TGCAAGCTAT GTGGCAGGTT GGTGATAGTT TAAGGGTTAA TGGTTGGTCT AATTCTACTT ATTTTTGGAT TGGTATTTTA GGCTTAATGT TTATATTTTA TGGTTTGGCT TTAAGTGCAA GTTCTACACC TTTTGCTGCT TTATTAGTAG ATATTTCTGA TGAAGATAAT CGTTCTAAGG TTGTCGGTAT AGTCTGGTCA ATGTTGATGG TGGGAATTAT TATTGGGGCT ATTACTAGTA GTTTTTTATT GAAACAAGTT GGTGTGGATG CTCCGTTAGA AACTGTTCAA GTTTCTATTA ATAATTTGTT TATTATAATA CCGGCAATTG TTTTGGTTTT TGCTTTTATT GGTACTGTGG GAGTTGAGGA AAAATACTCT CGTTATGGCA GTCGTTCAAC TATTGCTAAC CGGGAGGATC AAGTTACTAT GGGAACAACT TTAAAAATTT TAAAGGCTAA TAGACAAACT GGTTTGTTTT TTACTTTTGT GTTTGTATTA ATTATTAGTT TGTTTATGCA GGATGCTGTT TTGGAGCCTT ATGCTGGGGA AATATTTCTG ATGCCAATTT CTGAAAGTAC TAGGTTGAAT GCTGTTTCGG GAATAGGAAC TTTAATTGGG TTAGGTACAA CGGGTTTTTT AGTAGTACCA AGGTTGGGAA AGAAAAATTC TTTGAAGGTT GGATGTGTGG CAACAACAAT TAGTTTTATT TTGATAGTTA TGTCTGGGTT TACTGGTAAG CTTTCTTTGT TTTTAAGTGC TTTATTTTTG TATGGTTTGG CTGCAGGTTT AACTACTACT GCTGCTCTTA GTTTAATGTT AGATTTAACG GCGGCGGAAA CGGCGGGAAC TTTTATTGGG GCTTGGGGTT TAGCACAGGC AATGGCACGA GGTTTATCTA CGGTTATTGG TGGTGTGACT TTGGATGTTG GTCGCCGTTT ATTTAATGTT TCAATGTTGG CTTATGGGTT GGTTTTTCTA TTAGCAGGAG TGGGAATGAT ACTTTCTATT TTCTTGCTCA ATAGGGTTAA TGTTAGAGAA TTTCAAGATA ATGCTAGTGT GGCGATCGCT ACTATTTTAG AGGGAGAATT AGATTAG
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Protein sequence | MTSKDLKGTK IDNIDMEKNF PKLNLFTMFR LGFYQMGLGT MSVLTLGVLN RVMIAELKIP ATIVAITLSL YQFMAPARVW FGQMSDTKPL LGKHRTGYMW IGAVFFTVTA FFAVQAMWQV GDSLRVNGWS NSTYFWIGIL GLMFIFYGLA LSASSTPFAA LLVDISDEDN RSKVVGIVWS MLMVGIIIGA ITSSFLLKQV GVDAPLETVQ VSINNLFIII PAIVLVFAFI GTVGVEEKYS RYGSRSTIAN REDQVTMGTT LKILKANRQT GLFFTFVFVL IISLFMQDAV LEPYAGEIFL MPISESTRLN AVSGIGTLIG LGTTGFLVVP RLGKKNSLKV GCVATTISFI LIVMSGFTGK LSLFLSALFL YGLAAGLTTT AALSLMLDLT AAETAGTFIG AWGLAQAMAR GLSTVIGGVT LDVGRRLFNV SMLAYGLVFL LAGVGMILSI FLLNRVNVRE FQDNASVAIA TILEGELD
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