| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0209 |
|---|
| Symbol | |
|---|
| ID | 4241805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 315196 |
|---|
| End bp | 317253 |
|---|
| Gene Length | 2058 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638105554 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_720171 |
|---|
| Protein GI | 113474110 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0673077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCATA AATATTTGTG GCTAAAGTTA AAAAAAATAG CAAAATTAGA ACTACCAAAT
TATCTTAAAG CAACAAATAA TCCCTTAACT TTTCCAAGCA AGAGAGAAAC TAAAACCCAC
CAAAAGCAAA TCGCCAAAAT ATTAATTATT GCTTGTTTAA TACCTTTACT ATTTTTTATA
ATACCAGCTT GGGGACAAGC CATTGATAAT TATCTAGAAA AAGCTCCAGT AGAATTGAAT
GGTCAAAAAT TATTTGAAGT AGCAGGTAAT AAAGAAAAAA ATTTGACTGC TATTGAACGA
GCGGCAATAA TTAGCTCAAA ATTAGAAAAT ATCTTCAGCT CAGATGAATC TATAGAGGTA
AATATAGATA AGCAAAACAA TCAAGTAATT TTGCTTACTA ATAATAACTA TTTACTAACT
ATAACTGCTG CAGATGTTAA AGGAAGAATG AAAACAGAAG AGCAAGCAAT CATCTGGAAA
GATAAGATTG AAGAAAGTTT TAAAGCAGGC AAAAAAAACT CTCATTCTCC TTACTTATTA
AAAGAATTAT CCATTAGCAT TGTTTTAATT TTAGCAGCTT TAAGTATAGA GCAATTTTGG
GGTTTATTAA AGTTTAAAAT TAGCAATTTC TGTGAAAAAA AATATCCTCA AATTGTTAGT
TATTTACCAA AATTTTTGCC ATTAACGATA ATTTCTATCC GAGTCATAGT ATGGATAAAA
ATCACCCTAT ATATCACCTA TCTACTACCA TTTACTCGTG AGCCTAGTGA GAAACTATTA
AGTATTTTAT ATAATAGTTT TACTTCTCGT ATCTTTGACT TAGGCAACAA AGGTCTTTCC
ATTGTTGATT TGGTATTTTT AACTGGGTTA ACTATTGGAA TGTGGAAAGG AGTTGGGTAC
TTTATTGATA TTTTTAGAAC TAAAATTGTA AGTTTAACAG GAGCAGAGCG AAGTGTTCAA
GATACAATCA GTTTCTTAGC TAAATATGGA TTAATTTTTT TTGGTATACT AATTATTCTA
CAACTTTGGG GTGTAGATAT TAGTTCTTTG GCAATTATTG CTAGTGTTCT TGGTGTAGGT
ATTGGTTTTG GTCTACAGAA TATTGCTAAT AATTTTATGA GTGGTATTAT TCTAGTTTTT
GAGCGACCAA TTCAAGTGGG TGACTTTATT GAAGTAGGAA ATTTAGTAGG CATTGTAAAA
AAAATAGGTT TGCGTAGCAC TTACATTACA ACTTTAGACA AAGTTTCTTT AATTGTTCCT
AACTCTAGAT TTCTAGAAAA TGAAGTTTTA AATTGGAGTC ATGGTAACCC TATTTCTAGG
ATAAAAATAC CGATAGGTGT TGCTTATGGT TCTAATGTTA AGTTAGTTAA GAAAGCTATA
TTAGAAGTAG CAAAAAGTCA TCCAGAAGTA TTATTACATC CCTCCCCACA AATTTGGTTT
CAAGAATTTG GTGATAGTTC TCTAAAATTT CAATTGTTGA TTTGGACTAG AGAACCACAA
AAACAATATC AACTAAAAAG TGAGTTAAAT TATCGCATTG AGGCAAGTCT ACAAAGATAT
AAAATTGAAA TTCCTTTTCC TCAAAGAGAT TTGCATTTAA AATCTCCCAA AATAGAGCAA
ATGATAGAGA TTTGGATGCG GAAAAATTCA CCTCCTCAAG AACAAATTTA CTATCCGAAT
AGCCTTAAGT TTAAGTTTGA AAATAATGCT TCTCAGTTAG ATATAGATGA GGAGGATGAA
GCCAAAGCAT TGACTAAAGA TTCTCTCAAT AATCAAACCA ACAAAAATAT AAATATAGAT
ACCTTAGTTG AAGAAATGCG TGGTCATAAT GGAGTATCAA TTAAAGATCG TCAACATAGG
TGGGATGTCT ACTCAAAATG TTTTGTTGGT TCTGAGGCAG TACAGTGGTT AATGAGAACT
CAAAAACTTA ACTTAAGTCA AGCAATTTCT ATGGGTCAAT TATTAATAGA CCGTGGCTTA
ATTCATCATG TTGTAGATAA ACATAGTTTT AAAAATCAGT ATATTTTCTA TCGTTTTTAT
GAAGATGAAA ACTACTAG
|
|---|
| Protein sequence | MWHKYLWLKL KKIAKLELPN YLKATNNPLT FPSKRETKTH QKQIAKILII ACLIPLLFFI
IPAWGQAIDN YLEKAPVELN GQKLFEVAGN KEKNLTAIER AAIISSKLEN IFSSDESIEV
NIDKQNNQVI LLTNNNYLLT ITAADVKGRM KTEEQAIIWK DKIEESFKAG KKNSHSPYLL
KELSISIVLI LAALSIEQFW GLLKFKISNF CEKKYPQIVS YLPKFLPLTI ISIRVIVWIK
ITLYITYLLP FTREPSEKLL SILYNSFTSR IFDLGNKGLS IVDLVFLTGL TIGMWKGVGY
FIDIFRTKIV SLTGAERSVQ DTISFLAKYG LIFFGILIIL QLWGVDISSL AIIASVLGVG
IGFGLQNIAN NFMSGIILVF ERPIQVGDFI EVGNLVGIVK KIGLRSTYIT TLDKVSLIVP
NSRFLENEVL NWSHGNPISR IKIPIGVAYG SNVKLVKKAI LEVAKSHPEV LLHPSPQIWF
QEFGDSSLKF QLLIWTREPQ KQYQLKSELN YRIEASLQRY KIEIPFPQRD LHLKSPKIEQ
MIEIWMRKNS PPQEQIYYPN SLKFKFENNA SQLDIDEEDE AKALTKDSLN NQTNKNINID
TLVEEMRGHN GVSIKDRQHR WDVYSKCFVG SEAVQWLMRT QKLNLSQAIS MGQLLIDRGL
IHHVVDKHSF KNQYIFYRFY EDENY
|
|---|
| |