Gene Tery_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0185 
Symbol 
ID4242936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp275667 
End bp276845 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content33% 
IMG OID638105531 
Productaminotransferase, class V 
Protein accessionYP_720149 
Protein GI113474088 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA AGATTTCTCA ATTGTCAAGT TATCGACAAA ACTTTCCGGC TTTAGCTAAT 
AAAAATTATT TTAATTATGG TGGTCAAGGA CCTATGCCTA AAATATCTTT AGAGGCAATT
TATGATTCTT ATCAAAAAGT ACAAAATTTC GGACCTTTTT CTGGAAAAAT TGGTAAGTGG
GTGGTTAATG AAGCAGCTTT AATGCGAAGA GCGATCGCTA CTGAGTTAGG AGTTTCTCCA
GATACTATTG CTTTGACACC AAATGTTACT GTAGGTTGTA ATATTTCACT TTGGGGTTTA
AATTGGCAGG AGGGAGATCA TATCTTACTT TCTGACTGTG AACATCCGGG AATTATTGCT
ACAATTAAGG AGATTCAAAG ACGTTTTAAT ATAGAGGTTT CTACTTGTCC AATAATGGAA
ACCTTGAATA AAGGAAACCC TGTAACAGTA ATTAAAGAAA ATTTACGTCA GAATACAAAG
TTATTGGTAA TCAGTCATAT TTTGTGGAAT ACAGGTCAGG TTTTACCATT AACTGAAATT
GTTAAATTGT GCCATTCTTT ATTTAAATCT CCAATTAAAG TTTTAGCTGA TGCTGCTCAA
TCTGTAGGAG TTTTACCTTT ACAATTAGCA GAAACAGAGG TAGATTTTTA TGCTTTTACT
GGTCATAAAT GGTGGTGCGG ACCAGAAGGT TTAGGGGGAC TTTATGTAAG TCCTAAAGTT
AGGGAAAGTT TAATTCCTAC TTTTATTGGT TTGGGGAGTA TTTTGAGAGA TAAAGTTGAT
CAAATAATTG GCTGGAAACC TGATGGTAGA CGTTATGAAG TTTCTACTTC TGCTTATCCT
TTATATTCTG GTTTAAGGCA AGCAATAAGT CTACATAATC AATGGGGAAA TGCAATAGAA
AGGTATGATA GAATTCAAAG GTTAAGTAAA TATTTATGGG ATAATTTAAT CAAAATTCCT
GAAGTTAAAT GTTTATCCAC ATCACCGCCA GAAGCTGGAT TAGTTTCTTT TCAAGTAACT
AATGGTAAAT CACATCAAGA GTTAGTGAAT TTTTTAGAAA ACCAGGATAT TATGGTGCGA
ACTATTATTA ACCCAGATTG TGTGAGAGCT TCTATTCATT ATTTTAGTTT AGAGGCAGAA
ATTGATAAAT TAGTTGCAGA AATTAAAGCT TTTATTTGA
 
Protein sequence
MDQKISQLSS YRQNFPALAN KNYFNYGGQG PMPKISLEAI YDSYQKVQNF GPFSGKIGKW 
VVNEAALMRR AIATELGVSP DTIALTPNVT VGCNISLWGL NWQEGDHILL SDCEHPGIIA
TIKEIQRRFN IEVSTCPIME TLNKGNPVTV IKENLRQNTK LLVISHILWN TGQVLPLTEI
VKLCHSLFKS PIKVLADAAQ SVGVLPLQLA ETEVDFYAFT GHKWWCGPEG LGGLYVSPKV
RESLIPTFIG LGSILRDKVD QIIGWKPDGR RYEVSTSAYP LYSGLRQAIS LHNQWGNAIE
RYDRIQRLSK YLWDNLIKIP EVKCLSTSPP EAGLVSFQVT NGKSHQELVN FLENQDIMVR
TIINPDCVRA SIHYFSLEAE IDKLVAEIKA FI