Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0148 |
Symbol | |
ID | 4242433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 217777 |
End bp | 218829 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638105497 |
Product | glycosyl transferase family protein |
Protein accession | YP_720116 |
Protein GI | 113474055 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.341853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.155279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGGGC TACAAGAGTT TTACTATTTA AGCCTTGTAC CTCATGTGTC CGGAATCTGC TGTATATTAA AGTTCCCTCA TAAATTCTGT AATTTTTTAT GGCAAATGAT AAAAGTTAGT GTTTGCATCC CCACCTATAA CCGAGCAAAT TTGCTCCCCT ATGCAGTAAA TAGTGTTTTG AATCAAACTT ACAATGATTT TGAATTAATT ATAACTGATG ATGGTTCAAC AGATAATACT GCTGAAGTAG TTAGTCAGTG GAATGATTCT AGAATTCGTT ATATTAGGCA TCCACAAAAT ATTGGTAAAA GCAATAATAT GCGCTCTGGT TTTAATGCTG CCACAGGTGA ATACTTTATC AAATTTGATG ATGATGATGG TCTGACCCCA GATTTTTTGG AAAAAACAAT TTTCATTCTA GATCGAAATC CAAGTATTGA TTTTGTAGGA ACTGACCATT GGGTTATTGA TATTAACAAT CAACGAGATC AAAAAGTAAC CGATAAAAAT TCTCAAAAAT GGGGTAGAAC TCAACTTTTA GAAGGAAGAG TAAACAATTT ACTAGAAATA GTATTTATTA ATCAAAGTTT TCAAATTGGT GCAACATTAT TCCGTAATAG AACCCTACAA GAAGTAGGAT TTATGCGTCC TAATATACAA AATTGTGAAG ATAACGATCT ATTTGTCCGT CTAGCTCTAG CAGGAAAAAC AGGTTATTAT TTGCCAGAAA AATTAATGGA ATATCGTTTT CATCTAGAAC AGCATGGAAT TAACCGGGCA ATTCCTTATC TAACTGATAA GCTAAATTAT TTACAACAAT TTAATTTTAA GTTGAGTAAA TTAGAGTCAC TTAGAAAGTC AAGACTAGCA GAAACTCAGC TAATGTTGGG ACTACTACTA ATTGAAACAG GTAAAACTCA AAAAGGAAGG CATATGGTTT GGGAGCAAAA ATCTTTTTCT CCACTAAGAG CGTGGACTGG GCTAGCATTA TCTATATTAC CTATAGAAAC TCGTGAGCTT GCTTTCAAAT TTATACGTAG GCTACGCAGT TAA
|
Protein sequence | MQGLQEFYYL SLVPHVSGIC CILKFPHKFC NFLWQMIKVS VCIPTYNRAN LLPYAVNSVL NQTYNDFELI ITDDGSTDNT AEVVSQWNDS RIRYIRHPQN IGKSNNMRSG FNAATGEYFI KFDDDDGLTP DFLEKTIFIL DRNPSIDFVG TDHWVIDINN QRDQKVTDKN SQKWGRTQLL EGRVNNLLEI VFINQSFQIG ATLFRNRTLQ EVGFMRPNIQ NCEDNDLFVR LALAGKTGYY LPEKLMEYRF HLEQHGINRA IPYLTDKLNY LQQFNFKLSK LESLRKSRLA ETQLMLGLLL IETGKTQKGR HMVWEQKSFS PLRAWTGLAL SILPIETREL AFKFIRRLRS
|
| |