Gene Tery_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0146 
Symbol 
ID4242431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp214536 
End bp215744 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content40% 
IMG OID638105495 
Productglycosyl transferase, group 1 
Protein accessionYP_720114 
Protein GI113474053 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0724066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TAATGCTTTC CTCTACTTTT CCTTATCCTC CTAGCAAAGG CGGTACACAA 
GTTAGAACAT TTAATCTACT GAAATTTTTG AGCAAGAAAC ACTCTGTTAC TTTGCTAACA
CAAAGCTCTC CAGATGTCAA TAATTTAGAA GTAGATTCAT TGAGATCTTA TGTAGAAGAA
TTGGCCATAT TTCCCCGCCC TCAAGAGCCT AAAAAAGGAA ATTTTGCAAA ACTAAGACGT
TTTAGTAATT TTATAATAGA AGGTACTCCA CCCAGCGTTA TCTCTATATA TTCGCCAGAA
ATGCAAAAGT GGGTAGATGA GTTTGTGGGA GCAGGTAGAT GTGAGGCCAT TACTTGCGAA
CATTCCGTTA ATGAAATTTA TATTCGTCAT CAATGGCAGG AGAAAGTCAA AACCCTAGTT
AATGTCCACA GTTCAGTTTA TGGCACTTGT CGGCAACAGT TGGAAACTGG CATAGCAGAG
AAGCCTTTGC GAGATAGACT GAATCTTCCC CTACTCCTGC GTTATGAAAA ACGTTATTGC
TCAAAATTTT CCTTTATAAT TGCCACAACT GAAGAAGATG GGAAACAACT AAAGGAATTT
AGCCCCAATA GTCAAATTTC AGTTATTCCG AATGGGGTAG ATCTTAGTCA TTTTCCTTGT
CGTAGTAGCG ACCCAGGAGG AAAGCAATTA ATTTTTGTGG GAGCTATAGA TAATTTTCCT
AATATTGATG CAGTTCGGTT TCTGACTCTA GAGATATTGC CTAGGGTACA AGAACGTTAT
CCTGATACAA CCTTAGCATT GGTAGGGGCA AGACCAGTAC GAGAAGTACA GGAATATTCG
ACTCGCCCAG GGGTAAAAGT TACGGGCCGC GTACCTTCAA TAGCAGAATA TTTACATCAG
GCTACAATTT GTGTAATTCC TATGCGCACT GGTTTTGGAA TTAAAAATAA AACCTTAGAG
GCAATGGCAG CAGGTACACC TGTTGTGGCC AGCAATCGTG GTTTGGAAGG ATTAGCAGTT
GATGGTGCAG GTAAACCACT AAGAGCATTA AGGGCAAATT ATGTAGAAGA ATATGTAGAA
GCCATTGGTC GGTTATTTGA GGATAGGCAG TTAAGACAAA CGTTGTCAGA AAACGGGCGA
TCACTGGTAG AAACCGAGTA TACTTGGAAA ATTCAAGGTC AGCGGTATGA AAGGGTATTA
CTAGGATAA
 
Protein sequence
MKILMLSSTF PYPPSKGGTQ VRTFNLLKFL SKKHSVTLLT QSSPDVNNLE VDSLRSYVEE 
LAIFPRPQEP KKGNFAKLRR FSNFIIEGTP PSVISIYSPE MQKWVDEFVG AGRCEAITCE
HSVNEIYIRH QWQEKVKTLV NVHSSVYGTC RQQLETGIAE KPLRDRLNLP LLLRYEKRYC
SKFSFIIATT EEDGKQLKEF SPNSQISVIP NGVDLSHFPC RSSDPGGKQL IFVGAIDNFP
NIDAVRFLTL EILPRVQERY PDTTLALVGA RPVREVQEYS TRPGVKVTGR VPSIAEYLHQ
ATICVIPMRT GFGIKNKTLE AMAAGTPVVA SNRGLEGLAV DGAGKPLRAL RANYVEEYVE
AIGRLFEDRQ LRQTLSENGR SLVETEYTWK IQGQRYERVL LG