Gene Tery_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0100 
Symbol 
ID4243041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp135778 
End bp138564 
Gene Length2787 bp 
Protein Length928 aa 
Translation table11 
GC content32% 
IMG OID638105456 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_720075 
Protein GI113474014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAT TTTTATTTAC AGATAACAGC GATCTCTCGC CAATATCTGA TGTATTGAAT 
GGAGTAAATA CTCAACCGGA CCCAATTAAG CTACAAGAAG TAACTTTACA AACTGAGTCA
AAAAGTACCA ATTTTGAGGT TGATAAATAT AATGTAGAAA CTGCTTTTAT TCCTGATAAA
TATCAAACAC ATTTAGATAA AACTTTATTT ACAGAACCAG AAATTCTTAG TAAAGAATTA
ACAGAAAAAT CTGTTGTTTT GAAGTATGCT AGTCAAAGCC AAAAAGACCC CCTAACAGGA
GTAGAAGATG GAGAACAATT AGTAGGAAAA TCCATAACTC AAGAACCACC TTTACTATTT
ACTGAAGTTT CTGAAAAAGG AAAGGTAAAA AGAAACTTTA AAAATTCACC TATAATTCGT
CAGCGACTAG TTGAGTTAGA CTTTAATCTT CTAGATAACA CAGATGAATC TGACAAAATT
ATCAGATTAA ACTTATTTTC AGATGTTACT CTAGATGTCA AACTTGGGAA AGTAAAAAGT
TCGCCAAATC AGCAAGATTG GGTAAGAACG GGTAAAGTTA TAGGAGTCGA AAATAGTCAA
GTTATTTTGA TTAGTAGTAA AGATGAAAAT AATATTTTAG GAGAAATTAG ACTGGACTAC
ATAGAGCCAG GAAAACAAGA TCAATTTTAT GAAGTTCGTT CTACAGACTC AGATAAATTT
GTAGTCAATC AACTAGAAAA TCCTTCTTTC TATCATTGTT ATATTTGTGG TGGTATTCAT
GAAATATCCA ACCATCAAAA TAACGAATCA AATTTAGAAG ATAACCTTGG CAATGGCCAT
TTTGATAGTG TTTTTAATAA AAAAGTCCTA AGAAAAACAT CCCTATTATC TAGTAACAAA
AAAATCAACG GTTTATTAAC TAAAACACTT TGGGATACAG AAGAAGAAAA TATAATTACT
TATAGTTTTT TCTCAGAGCA AGCAATTAAT TCATATTATG GAAGAGAAAA TCCATTACCA
GTAACTGACC CTATTAAAAT AAATGTCAAA GATATTTTTA ATCTCTTTGA ACAATATATA
GATGTTAGGT TTCAAGAAGT AGGAGATACA GCAGATAACT ACGGTCAAAT ACGAATAATG
TTATCCAATG GACCATTACA AAATGAATCC CGTGGTTATG CATATCAACC ACCAGGTACA
TCAGAAAATC CTGCTGATGG AGATATACAT TTATCATCTG TTTATCAAGA CGAATACGAG
GATGTTCCCG GAAGTTATGG TTATATAACT ATCGCCCATG AAATAGGTCA TGCTTTAGGC
TTAAAACATC CTGGTAATTA TAGTCCTGGA GAACGAGCTC CTTTCTTATC TTATGCTCAA
GATAACAATA CTAATACCAT GATGACCTAC ATTGGTTTAG GTGGTTTAAA TCAATATTCT
ACGACACCAA TGACTTATGA TATTCAAAGT TTACAATATT TATATGGTAG AAATAACAAC
TTTAATGCTG AAAATACAAC TTATTCATTT GATAGGGTTT ATGGATTTTT TGATGGTAAT
CAATATTTAG GCAGTTCTGA CACAGAAACA AAACTAACCC TGTGGGATGG GGGTGGCTTT
GATACTATCG ATCTATCGAA ACTTCCCGAT TTAGAATTAG CAGATTTTAC TTATGATTAT
CGCATAGATT TAAGAGAGGG TGGGTTAATT ACTACTACTG ATGCTTATAA CCAACATGAA
TATATTGCAT TTCAAGATAC TAGTGGTAAG AAATATAAGA CTTCTACTTC CGGTACGGCG
ATCGCTTATG GTGCAGTTAT GGAAAATCTA ATTAATTCTC GTGGAGATGA TTTGATTTAT
GCTAATAATG CAGCCAATAA ATTTAGTGGT TATACACCAG GAAAATATAC CGGAAATGAT
AAAATTTTCA GGACAAATCA AAAGGATGTT TTAGACTTGT CAGAATATAG TAGTTCCCAA
GTTAAGAGAA GGCGAAAGAA GAAAGATTTA ATCCTTGACT TAGGTGAAGA AAATGGTTCA
ATTACTATTT CTAATTATTA TGGAGTTAAA GCAAAAAAAC GGATTGAGAT ATTGTATGAG
AAACCAACTA AACCAGAAAT TACTATCAAC GATATTACTG TAAATGAGGG TAATAGTGGA
ACACAAAGAC CACAATTTAC AGTCAATCTT AGTGAACCTA GTGAAAGCAC CGTAAGAGTT
AATTTTGTTA CCGTAAATAA TAGAGCTAAA GCAGGTTCAG ATTATCGACG TCGTAATGGC
ACTATTACTT TTAAACCAGG TCAAACCACA AAACAAATTA CTGTACCTGT TTTAGGAGAT
ACTGTTGATG AGTTTAATGA GAAATTCTTT GTCAAACTTA GGAAACCCCG AAATGCTACT
ATTGCAGATA ATAAAGGTGT TGCAACTATT AAAAATGATG ACTTAACAAC TATTTCTATT
AGTGATGCTA AAGTCACCGA AGGTGATAGT GATGAGAACA ACGGTAGCTT TCAAGTAACT
CTTGACCAAA AAAGTCCGAG GACAGTAAAA GTAGATTATG AAACTAAAGA TAGTACAGCT
ATCAATGGTT CAGACTATCG TTCTAAAACA GGTACGATAA AATTCAAACC TGGTCAGACA
AAGAAAATAA TTCAAATACC TATTATTGGT GACGAAAAAG TTGAAAAACA GGAATATTTT
TGGGTGGAAT TAAGTAATTC TCAAAATGCA GACATAGACA ATAAAAACCG TGCTGGTTTA
GGAACTATTC AAGACAATGA TGAATAG
 
Protein sequence
MLEFLFTDNS DLSPISDVLN GVNTQPDPIK LQEVTLQTES KSTNFEVDKY NVETAFIPDK 
YQTHLDKTLF TEPEILSKEL TEKSVVLKYA SQSQKDPLTG VEDGEQLVGK SITQEPPLLF
TEVSEKGKVK RNFKNSPIIR QRLVELDFNL LDNTDESDKI IRLNLFSDVT LDVKLGKVKS
SPNQQDWVRT GKVIGVENSQ VILISSKDEN NILGEIRLDY IEPGKQDQFY EVRSTDSDKF
VVNQLENPSF YHCYICGGIH EISNHQNNES NLEDNLGNGH FDSVFNKKVL RKTSLLSSNK
KINGLLTKTL WDTEEENIIT YSFFSEQAIN SYYGRENPLP VTDPIKINVK DIFNLFEQYI
DVRFQEVGDT ADNYGQIRIM LSNGPLQNES RGYAYQPPGT SENPADGDIH LSSVYQDEYE
DVPGSYGYIT IAHEIGHALG LKHPGNYSPG ERAPFLSYAQ DNNTNTMMTY IGLGGLNQYS
TTPMTYDIQS LQYLYGRNNN FNAENTTYSF DRVYGFFDGN QYLGSSDTET KLTLWDGGGF
DTIDLSKLPD LELADFTYDY RIDLREGGLI TTTDAYNQHE YIAFQDTSGK KYKTSTSGTA
IAYGAVMENL INSRGDDLIY ANNAANKFSG YTPGKYTGND KIFRTNQKDV LDLSEYSSSQ
VKRRRKKKDL ILDLGEENGS ITISNYYGVK AKKRIEILYE KPTKPEITIN DITVNEGNSG
TQRPQFTVNL SEPSESTVRV NFVTVNNRAK AGSDYRRRNG TITFKPGQTT KQITVPVLGD
TVDEFNEKFF VKLRKPRNAT IADNKGVATI KNDDLTTISI SDAKVTEGDS DENNGSFQVT
LDQKSPRTVK VDYETKDSTA INGSDYRSKT GTIKFKPGQT KKIIQIPIIG DEKVEKQEYF
WVELSNSQNA DIDNKNRAGL GTIQDNDE