Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0100 |
Symbol | |
ID | 4243041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 135778 |
End bp | 138564 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105456 |
Product | Na-Ca exchanger/integrin-beta4 |
Protein accession | YP_720075 |
Protein GI | 113474014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAAT TTTTATTTAC AGATAACAGC GATCTCTCGC CAATATCTGA TGTATTGAAT GGAGTAAATA CTCAACCGGA CCCAATTAAG CTACAAGAAG TAACTTTACA AACTGAGTCA AAAAGTACCA ATTTTGAGGT TGATAAATAT AATGTAGAAA CTGCTTTTAT TCCTGATAAA TATCAAACAC ATTTAGATAA AACTTTATTT ACAGAACCAG AAATTCTTAG TAAAGAATTA ACAGAAAAAT CTGTTGTTTT GAAGTATGCT AGTCAAAGCC AAAAAGACCC CCTAACAGGA GTAGAAGATG GAGAACAATT AGTAGGAAAA TCCATAACTC AAGAACCACC TTTACTATTT ACTGAAGTTT CTGAAAAAGG AAAGGTAAAA AGAAACTTTA AAAATTCACC TATAATTCGT CAGCGACTAG TTGAGTTAGA CTTTAATCTT CTAGATAACA CAGATGAATC TGACAAAATT ATCAGATTAA ACTTATTTTC AGATGTTACT CTAGATGTCA AACTTGGGAA AGTAAAAAGT TCGCCAAATC AGCAAGATTG GGTAAGAACG GGTAAAGTTA TAGGAGTCGA AAATAGTCAA GTTATTTTGA TTAGTAGTAA AGATGAAAAT AATATTTTAG GAGAAATTAG ACTGGACTAC ATAGAGCCAG GAAAACAAGA TCAATTTTAT GAAGTTCGTT CTACAGACTC AGATAAATTT GTAGTCAATC AACTAGAAAA TCCTTCTTTC TATCATTGTT ATATTTGTGG TGGTATTCAT GAAATATCCA ACCATCAAAA TAACGAATCA AATTTAGAAG ATAACCTTGG CAATGGCCAT TTTGATAGTG TTTTTAATAA AAAAGTCCTA AGAAAAACAT CCCTATTATC TAGTAACAAA AAAATCAACG GTTTATTAAC TAAAACACTT TGGGATACAG AAGAAGAAAA TATAATTACT TATAGTTTTT TCTCAGAGCA AGCAATTAAT TCATATTATG GAAGAGAAAA TCCATTACCA GTAACTGACC CTATTAAAAT AAATGTCAAA GATATTTTTA ATCTCTTTGA ACAATATATA GATGTTAGGT TTCAAGAAGT AGGAGATACA GCAGATAACT ACGGTCAAAT ACGAATAATG TTATCCAATG GACCATTACA AAATGAATCC CGTGGTTATG CATATCAACC ACCAGGTACA TCAGAAAATC CTGCTGATGG AGATATACAT TTATCATCTG TTTATCAAGA CGAATACGAG GATGTTCCCG GAAGTTATGG TTATATAACT ATCGCCCATG AAATAGGTCA TGCTTTAGGC TTAAAACATC CTGGTAATTA TAGTCCTGGA GAACGAGCTC CTTTCTTATC TTATGCTCAA GATAACAATA CTAATACCAT GATGACCTAC ATTGGTTTAG GTGGTTTAAA TCAATATTCT ACGACACCAA TGACTTATGA TATTCAAAGT TTACAATATT TATATGGTAG AAATAACAAC TTTAATGCTG AAAATACAAC TTATTCATTT GATAGGGTTT ATGGATTTTT TGATGGTAAT CAATATTTAG GCAGTTCTGA CACAGAAACA AAACTAACCC TGTGGGATGG GGGTGGCTTT GATACTATCG ATCTATCGAA ACTTCCCGAT TTAGAATTAG CAGATTTTAC TTATGATTAT CGCATAGATT TAAGAGAGGG TGGGTTAATT ACTACTACTG ATGCTTATAA CCAACATGAA TATATTGCAT TTCAAGATAC TAGTGGTAAG AAATATAAGA CTTCTACTTC CGGTACGGCG ATCGCTTATG GTGCAGTTAT GGAAAATCTA ATTAATTCTC GTGGAGATGA TTTGATTTAT GCTAATAATG CAGCCAATAA ATTTAGTGGT TATACACCAG GAAAATATAC CGGAAATGAT AAAATTTTCA GGACAAATCA AAAGGATGTT TTAGACTTGT CAGAATATAG TAGTTCCCAA GTTAAGAGAA GGCGAAAGAA GAAAGATTTA ATCCTTGACT TAGGTGAAGA AAATGGTTCA ATTACTATTT CTAATTATTA TGGAGTTAAA GCAAAAAAAC GGATTGAGAT ATTGTATGAG AAACCAACTA AACCAGAAAT TACTATCAAC GATATTACTG TAAATGAGGG TAATAGTGGA ACACAAAGAC CACAATTTAC AGTCAATCTT AGTGAACCTA GTGAAAGCAC CGTAAGAGTT AATTTTGTTA CCGTAAATAA TAGAGCTAAA GCAGGTTCAG ATTATCGACG TCGTAATGGC ACTATTACTT TTAAACCAGG TCAAACCACA AAACAAATTA CTGTACCTGT TTTAGGAGAT ACTGTTGATG AGTTTAATGA GAAATTCTTT GTCAAACTTA GGAAACCCCG AAATGCTACT ATTGCAGATA ATAAAGGTGT TGCAACTATT AAAAATGATG ACTTAACAAC TATTTCTATT AGTGATGCTA AAGTCACCGA AGGTGATAGT GATGAGAACA ACGGTAGCTT TCAAGTAACT CTTGACCAAA AAAGTCCGAG GACAGTAAAA GTAGATTATG AAACTAAAGA TAGTACAGCT ATCAATGGTT CAGACTATCG TTCTAAAACA GGTACGATAA AATTCAAACC TGGTCAGACA AAGAAAATAA TTCAAATACC TATTATTGGT GACGAAAAAG TTGAAAAACA GGAATATTTT TGGGTGGAAT TAAGTAATTC TCAAAATGCA GACATAGACA ATAAAAACCG TGCTGGTTTA GGAACTATTC AAGACAATGA TGAATAG
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Protein sequence | MLEFLFTDNS DLSPISDVLN GVNTQPDPIK LQEVTLQTES KSTNFEVDKY NVETAFIPDK YQTHLDKTLF TEPEILSKEL TEKSVVLKYA SQSQKDPLTG VEDGEQLVGK SITQEPPLLF TEVSEKGKVK RNFKNSPIIR QRLVELDFNL LDNTDESDKI IRLNLFSDVT LDVKLGKVKS SPNQQDWVRT GKVIGVENSQ VILISSKDEN NILGEIRLDY IEPGKQDQFY EVRSTDSDKF VVNQLENPSF YHCYICGGIH EISNHQNNES NLEDNLGNGH FDSVFNKKVL RKTSLLSSNK KINGLLTKTL WDTEEENIIT YSFFSEQAIN SYYGRENPLP VTDPIKINVK DIFNLFEQYI DVRFQEVGDT ADNYGQIRIM LSNGPLQNES RGYAYQPPGT SENPADGDIH LSSVYQDEYE DVPGSYGYIT IAHEIGHALG LKHPGNYSPG ERAPFLSYAQ DNNTNTMMTY IGLGGLNQYS TTPMTYDIQS LQYLYGRNNN FNAENTTYSF DRVYGFFDGN QYLGSSDTET KLTLWDGGGF DTIDLSKLPD LELADFTYDY RIDLREGGLI TTTDAYNQHE YIAFQDTSGK KYKTSTSGTA IAYGAVMENL INSRGDDLIY ANNAANKFSG YTPGKYTGND KIFRTNQKDV LDLSEYSSSQ VKRRRKKKDL ILDLGEENGS ITISNYYGVK AKKRIEILYE KPTKPEITIN DITVNEGNSG TQRPQFTVNL SEPSESTVRV NFVTVNNRAK AGSDYRRRNG TITFKPGQTT KQITVPVLGD TVDEFNEKFF VKLRKPRNAT IADNKGVATI KNDDLTTISI SDAKVTEGDS DENNGSFQVT LDQKSPRTVK VDYETKDSTA INGSDYRSKT GTIKFKPGQT KKIIQIPIIG DEKVEKQEYF WVELSNSQNA DIDNKNRAGL GTIQDNDE
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