| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0059 |
|---|
| Symbol | |
|---|
| ID | 4242442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 82492 |
|---|
| End bp | 84570 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638105426 |
|---|
| Product | WD-40 repeat-containing serine/threonin protein kinase |
|---|
| Protein accession | YP_720045 |
|---|
| Protein GI | 113473984 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.367028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATC GCATCAATTC TCAAAACCAG AATCCAGAAG ATGCTGACAA GAATATTGTC
AGTCAAAATG AGACAATAGT GGGAACATCC AAATGTCCAC CTATACTCAA AGAACGCTAC
CAAGTGATCA AACCCTTGGG TGAAAGTGTC TGGAACCATA CATTTCTCGC TATTGACCAC
GATAAACCTT CTAAACCACC GTGTATTATC AAAGAATTTG TCAACCTAGA CGACATAAAG
GACCTAGTTT TTCAGAGTCA AGAAGTTATT CCAACATTTT TTAGCTGTGA CCCAGTGCAG
CTAGACAAAA TTGGCAAACA TCCCCATATT CCGGAACTAT TAGCATCTAT AGAACATGAT
GGCCACCATT ATTTAGTACA AGAATACATT GAAGGCTCAA ATCTGGCCAC AGAACTTATA
GAATATGGTG TCTTTAGTGA AAGTAAAATT TGGCAAATAT TGAATCAATT ATTACTAGTT
TTGGAGTTGA TCCACGACCA TCACTTGATT CATGGAGATA TTAAACCAGA AAATATAATT
TGTCGGAGAA AGCAAGGAAC AAATACTCAG GAATTTGTTT TAGTTGATTT TGGAGTAACT
ATCTCCGCTA CTGGAGATTT ATTCTCAATA GGAAGTATTA ATGGTTCTGC TGAATATGCA
GCCCCAGAAC AAACACAGGG GAAAGTCTAC CCCAACAGTG ATATATATAG TTTAGGTGTA
ACTTGTCTGC ATCTATTAAC AATGGTTTCA CCCTTTGAAC TGTTTGATAT TAAAGCCGAA
AAGTGGGTGT GGCAAGACTA TTTGAAACAT CCCATAAGTA GACATCTTGG TCGTATCTTA
GATAAAATGA TACAACGAGA TCATCGTCAA AGATATCAGT CTGCAGCAGA AGTTATTAAA
GATATCAAGT ATGGACCAAC ACCAGCAGAT GTTATACTGC AAAAACAAAA TTGGAATGTA
ACTATTTGGG GGGGAGTAGC GATCGCTATG TTATCATTAG TAATTAGCTC TCGTGTACCA
TCTGCCAAAC CTCGGCCATC ACTTTCTCCA TCTTCCAACA CTACTACTAT TCCTAATGAA
GAGCGAAGTT TCCCCAGACC AAAAATTAAG GAGGAGTATA AAAACACACT CCCATCATTA
CAACCATATA CAGGAGTAGG AGACAAACTT TCTCCACTAC GAACTTTAGC AACAACTTCC
GGTCCAGTAT GGTCGATCAC CACTAGCCCC GATGGTCGTA TTGTTGCTAG TGGTAGTACA
AACGGGAGTA TTCAACTATT GCATTTGCGT AGCGGGCAAA ATTTGGGTCA ATTATCAGGA
CATGATGGAC CCATCTGGTC TGTTGCTATT AGTCCAGATG GTCGTACTCT CGTTAGTGCT
AGTGGTGATA GTACGCTCAA AATTTGGAAT CTTTACACTC GTAGATTGAA AAATACCTTA
TCTGGTCATC TTCAAGATGT TTTGTCTGTA GCCATTAGTC CAGACGGCAA TACGATCGCC
AGTGTCAGTA AAGACAAAAC TATTAAACTG TGGGATATTA ATAGTGGTTT GTTGTTATAT
ACTCTTTATG GACATTTAGA TGTAGTTCAG TCTGTTGCTT TTAGTTCAGA TGGCAAAACC
TTAGCTAGTG GTAGCAATGA TGGTACTGTT AAACTATGGA ATTGGCGTGA TGGTAGACTA
CTCAGCACAC TGAAGGGACA CCGAAAACCT GTGTGGTCGG TTGCTATTAG CCCCGATGGT
AAGACTTTGG CTAGTGGTAG TTGGGATAAG ACGATTAAAC TTTGGGAGAT TAATAATAAT
AGTTTTCAAA GAGTAATTAG ACGTTCTCAA CGTACTTTAA TTGGTCATTC TGAGAAAGTA
CAATCTCTCC AGTTTAGTCC AGACGGTGAA ACCTTAGCTA GTGGAGATTT TGACGGTACA
ATCAAACTCT GGCAAATTAA GACAGGTGGT TTGATGGGAA CCCTTAAAGG ACATTCTGCT
TGGGTAAATT TAACCTTTGA TCCTAGAGGA AAAACATTAA TTAGTGGCAG TTTTGATGAC
ACAATTAAAG TATGGCGCTT TTCTCCTTTG AGATTCTAA
|
|---|
| Protein sequence | MNYRINSQNQ NPEDADKNIV SQNETIVGTS KCPPILKERY QVIKPLGESV WNHTFLAIDH
DKPSKPPCII KEFVNLDDIK DLVFQSQEVI PTFFSCDPVQ LDKIGKHPHI PELLASIEHD
GHHYLVQEYI EGSNLATELI EYGVFSESKI WQILNQLLLV LELIHDHHLI HGDIKPENII
CRRKQGTNTQ EFVLVDFGVT ISATGDLFSI GSINGSAEYA APEQTQGKVY PNSDIYSLGV
TCLHLLTMVS PFELFDIKAE KWVWQDYLKH PISRHLGRIL DKMIQRDHRQ RYQSAAEVIK
DIKYGPTPAD VILQKQNWNV TIWGGVAIAM LSLVISSRVP SAKPRPSLSP SSNTTTIPNE
ERSFPRPKIK EEYKNTLPSL QPYTGVGDKL SPLRTLATTS GPVWSITTSP DGRIVASGST
NGSIQLLHLR SGQNLGQLSG HDGPIWSVAI SPDGRTLVSA SGDSTLKIWN LYTRRLKNTL
SGHLQDVLSV AISPDGNTIA SVSKDKTIKL WDINSGLLLY TLYGHLDVVQ SVAFSSDGKT
LASGSNDGTV KLWNWRDGRL LSTLKGHRKP VWSVAISPDG KTLASGSWDK TIKLWEINNN
SFQRVIRRSQ RTLIGHSEKV QSLQFSPDGE TLASGDFDGT IKLWQIKTGG LMGTLKGHSA
WVNLTFDPRG KTLISGSFDD TIKVWRFSPL RF
|
|---|
| |