Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0045 |
Symbol | |
ID | 4242582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 68747 |
End bp | 70330 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638105415 |
Product | glycoside hydrolase family protein |
Protein accession | YP_720034 |
Protein GI | 113473973 |
COG category | [S] Function unknown |
COG ID | [COG1543] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTG GCTATCTTTC CTTTGTGCTT CATGCCCATC TCCCTTTTGT GCGACATCCA GAAAGGGATT ATGTTTTAGA AGAAGAGTGG CTATTTGAAG CAATTACAGA AACTTATGTC CCCCTAATCC AAATGTTTGA GGGGTTAAAG CGAGATGGTA TAAATTTTAA ATTAACCATG AGTTTGACAC CAACCTTGGT GTCCATGCTA CGAGACCCCC TGCTACAAGG CCGCTATGAA CATCACTTAA CCTTACTCCA AGAATTAGCA GATAAAGAAA TTGACCACAA TATCCACAAT GGTCATCTTC GCTACCTGGC AGAACATTAC GTTACCCATT TCAATAATGT TCGGAAACTT TGGGAACGTT ATGACGGTGA CTTAATTACT GCATTTAAGC AGTTTCAAGA CAGCAACAAC CTAGAAATTA TGACCTGTGG AGCTACCCAT GGCTACTTTC CATTAATGAA AATGTATCCA CAGGCAGTAT GGGCCCAAAT AGAAGTTGCT TGTCAACATT ATGAAGAAAA CTTTGGTCGT CGCCCCACAG GTATTTGGGT GCCAGAATGT GCTTATTATC AAGGTCTAGA GCGATTACTG GCAGATGCTG GTATACGTTA TTTCTTAACA GATAGCCATG GTGTACTCTA CGCTAGACCT CGCCCCAGAT ATGGGAGTTA TGCTCCTATT TTTACAGAAA CAGGAGTTGC CGTTTTTTCT AGAGACCATG AATCTTCTCA ACAAGTATGG TCTTCCCAAG TAGGATATCC AGGAGACTCA GAATATAGAG AATTTTATAA GGATTTGGGT TGGGAAGCAG AATATGAATA TATTAAGCCT TATATTATGC CTGATGGCCA GCGCAAGAAT ACTGGCATTA AGTACCATAA AATTACAGGT CGTGGTCTGG GATTAGGAGA TAAACAACTT TACGACCCAT ACTGGGCCAG AGAAAAAGCA GCAGAACACG CTGGTAATTT TATGTTTAAT AGGGAGCGTC AGGTTGAGCA CTTATATCAA ATTATGGAGC AACTCCCGAT AATTGTTTCT CCCTACGATG CTGAGTTGTT TGGTCACTGG TGGTATGAAG GGCCTTGGTT TTTGGATTTC TTATTCCGCA AAACTTGGTA TGACCAAAGC ACTTATCGGA TGACTCATTT GGCAGATTAT TTACAGAAAC ATCCTGAACA TCAAGTTTGT CTTCCAGCCC AGTCTAGTTG GGGATATAAG GGTTTTCATG AATATTGGCT TAATCATACT AATTCTTGGA TTTATCCTCA TTTGCATAAG GCCACAGAAC GGATGATTGA ATTGGCACAA TACGAAGCAC AAGATGAATT GGTATTAAAG GCTTTAAATC AGGCAGGCCG AGAATTATTG CTGGCTCAAT CTTCAGACTG GGCATTTATT ATGAGTACGG GTACTATGGT TTCTTATGCT GTGCGGAGGA CACGATCACA TTTGATGCGT TTTAACAAGC TCTATGAAGA TATTCTACAG GGAAAGATTG ACTCTGGTTG GTTGGAAAAG GTTGAGGCGA TCGATAATAT ATTTCCTCAA GTCAACTATC GGGTTTACAG GTAA
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Protein sequence | MAIGYLSFVL HAHLPFVRHP ERDYVLEEEW LFEAITETYV PLIQMFEGLK RDGINFKLTM SLTPTLVSML RDPLLQGRYE HHLTLLQELA DKEIDHNIHN GHLRYLAEHY VTHFNNVRKL WERYDGDLIT AFKQFQDSNN LEIMTCGATH GYFPLMKMYP QAVWAQIEVA CQHYEENFGR RPTGIWVPEC AYYQGLERLL ADAGIRYFLT DSHGVLYARP RPRYGSYAPI FTETGVAVFS RDHESSQQVW SSQVGYPGDS EYREFYKDLG WEAEYEYIKP YIMPDGQRKN TGIKYHKITG RGLGLGDKQL YDPYWAREKA AEHAGNFMFN RERQVEHLYQ IMEQLPIIVS PYDAELFGHW WYEGPWFLDF LFRKTWYDQS TYRMTHLADY LQKHPEHQVC LPAQSSWGYK GFHEYWLNHT NSWIYPHLHK ATERMIELAQ YEAQDELVLK ALNQAGRELL LAQSSDWAFI MSTGTMVSYA VRRTRSHLMR FNKLYEDILQ GKIDSGWLEK VEAIDNIFPQ VNYRVYR
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