Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0033 |
Symbol | |
ID | 4241840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 55816 |
End bp | 56544 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105407 |
Product | hypothetical protein |
Protein accession | YP_720026 |
Protein GI | 113473965 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.36702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAC TATTGAACAA AATACTAAAT CTGGAGAAGC TCCCAACTTT AATAGTATCT CTACTATTAC TAATTTTGGC AACTATAATA CCAGTATCCT CTGTATCTGC AACTGGAGTT TATCAAATGC CCAATTTAGA CACAGGTAAT CGTACATTTA TTGTTGATGA TGCAGATGTT CTCAGTCGAG TTACTAAGAA TAAACTAAAC AATACTTTAG AAAATTTGGC TAATTTGACT GGGAATGAAG TTAGATTCGT TACTATCCGT CGCCTAGATT ATGGTGAGAC TGCCGATAGT TTTACTGAAA AATTATTTGA CAAATGGTTC CCTACTCTAG AAGCAAAAGC TAATCAAACC TTAGTAGTAT TAGATACTCT CACCAATAAT GATGCAATTC GTATAGGTGA TGCAGTTAAA ATATTTATGT CTAATGATAT TACTCAGAGT TTAGTTAATG AAACTATTCA AGTACCTATT AGAGATGGTA ATAAATATAA TGAAGCTTTC TTGGCAGCTA GCGATCGCCT AACTGCTGTA TTATCTGGAG AACCAGATCC AGGTCCTCCG GATATTAAAG ATGAGCTTTC AGCACAAGTA GCAGCTACTT TTAAATCAGC AGAGGAAACT AATGATCAAA GTGCAACTGT TTTGGTTGTT GTATTGTTAG TTATTGCTAC AGTTGTACCT ATGGCTACTT ATTTCTGGTA TCAAAGCTTT TCTGGCTAG
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Protein sequence | MVKLLNKILN LEKLPTLIVS LLLLILATII PVSSVSATGV YQMPNLDTGN RTFIVDDADV LSRVTKNKLN NTLENLANLT GNEVRFVTIR RLDYGETADS FTEKLFDKWF PTLEAKANQT LVVLDTLTNN DAIRIGDAVK IFMSNDITQS LVNETIQVPI RDGNKYNEAF LAASDRLTAV LSGEPDPGPP DIKDELSAQV AATFKSAEET NDQSATVLVV VLLVIATVVP MATYFWYQSF SG
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