Gene Tery_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0033 
Symbol 
ID4241840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp55816 
End bp56544 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content35% 
IMG OID638105407 
Producthypothetical protein 
Protein accessionYP_720026 
Protein GI113473965 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.36702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAC TATTGAACAA AATACTAAAT CTGGAGAAGC TCCCAACTTT AATAGTATCT 
CTACTATTAC TAATTTTGGC AACTATAATA CCAGTATCCT CTGTATCTGC AACTGGAGTT
TATCAAATGC CCAATTTAGA CACAGGTAAT CGTACATTTA TTGTTGATGA TGCAGATGTT
CTCAGTCGAG TTACTAAGAA TAAACTAAAC AATACTTTAG AAAATTTGGC TAATTTGACT
GGGAATGAAG TTAGATTCGT TACTATCCGT CGCCTAGATT ATGGTGAGAC TGCCGATAGT
TTTACTGAAA AATTATTTGA CAAATGGTTC CCTACTCTAG AAGCAAAAGC TAATCAAACC
TTAGTAGTAT TAGATACTCT CACCAATAAT GATGCAATTC GTATAGGTGA TGCAGTTAAA
ATATTTATGT CTAATGATAT TACTCAGAGT TTAGTTAATG AAACTATTCA AGTACCTATT
AGAGATGGTA ATAAATATAA TGAAGCTTTC TTGGCAGCTA GCGATCGCCT AACTGCTGTA
TTATCTGGAG AACCAGATCC AGGTCCTCCG GATATTAAAG ATGAGCTTTC AGCACAAGTA
GCAGCTACTT TTAAATCAGC AGAGGAAACT AATGATCAAA GTGCAACTGT TTTGGTTGTT
GTATTGTTAG TTATTGCTAC AGTTGTACCT ATGGCTACTT ATTTCTGGTA TCAAAGCTTT
TCTGGCTAG
 
Protein sequence
MVKLLNKILN LEKLPTLIVS LLLLILATII PVSSVSATGV YQMPNLDTGN RTFIVDDADV 
LSRVTKNKLN NTLENLANLT GNEVRFVTIR RLDYGETADS FTEKLFDKWF PTLEAKANQT
LVVLDTLTNN DAIRIGDAVK IFMSNDITQS LVNETIQVPI RDGNKYNEAF LAASDRLTAV
LSGEPDPGPP DIKDELSAQV AATFKSAEET NDQSATVLVV VLLVIATVVP MATYFWYQSF
SG