Gene Tery_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0008 
Symbol 
ID4242315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp10371 
End bp10973 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content35% 
IMG OID638105388 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_720007 
Protein GI113473946 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGG GTGAGGAAGA AATAGAGGAA GTTACAGAAA TAGAAGAGTT TGAAGTAACA 
ATTCCGGCGA AAGCTTTAAG AGAGGTTGAA CGTATGATTA GTATGGGTAA GTCTGGTTCT
TCTGTGACAT TAAAGTTTGA TGAAAATCAG GTTATTTTTG AGTTGGGAAA GCAGCGTTTA
ACTAGCCGAA AATTAGAAGG CCAATATCCT GCTTACCAAC AATTGTTACC TAATCAGTTT
ACTAATCAAA TTAATGTAGA TCGAAAAAAA TTTTTAGGAG CTGTGGAAAG AATTGCTGTT
TTAGCTGACC AAAAGAATAA TATCTTGAAG TGTACTATTG ATAGTGTTAA TCAAGAAATT
TCTTTATCTG TAGATGCTCA AGATGTGGGA AGTGGTCGAG AATCTATGGC AGCACAAATC
TCTAGTGATG AGCCAGAAGA AATTGCTTTT AATGTGAAAT ATTTGATTGA AGGATTAAAG
GCTATTCCCT CAGCTTCTGA AATTTCTATT CAGTTAAATA CTGCTACAAC TCCAGTAGTT
TTAAATCCTT TGGGAGGATT TCAAATGACT TATTTAATTA TGCCTGTCCA GTTAAGATCT
TAG
 
Protein sequence
MQEGEEEIEE VTEIEEFEVT IPAKALREVE RMISMGKSGS SVTLKFDENQ VIFELGKQRL 
TSRKLEGQYP AYQQLLPNQF TNQINVDRKK FLGAVERIAV LADQKNNILK CTIDSVNQEI
SLSVDAQDVG SGRESMAAQI SSDEPEEIAF NVKYLIEGLK AIPSASEISI QLNTATTPVV
LNPLGGFQMT YLIMPVQLRS