Gene HS_1729 details

Gene Information

• Locus tag: HS_1729
• Symbol: ssb
• ID: 4241263
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1961745
• End bp: 1962194
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638105322
• Product: single-stranded DNA binding protein
• Protein accession: YP_719934
• Protein GI: 113461865
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGTA TTAATAAAGT GATTATTGTC GGGAATCTTG GTGCAGATCC AGAAGTGAGA 
ACAATGCCAA ATGGCGAAGC GGTTTCCAAT ATTAGTGTAG CAACCAGCGA AAGTTGGACA 
GATAAAACGA CAGGTGAGAA ACGTGAATTA ACGGAATGGC ATCGGATTGT GTTTTATCGT 
CGTCAAGCTG AGATTGTCGG AGAATATTTA CGCAAAGGCT CGAAAGTCTA TGTTGAAGGA 
CGTCTAAAAA CCCGTAAATG GCAAGATCAA AATGGGCAAG ATCGTTATAC CACTGAAATT 
CAAGGCGATG TATTACAGAT GTTAGATAGT CGGAATGTAG CCAATAGCGT TGAGGGACAG 
GCTAGTTACC AAGCTACTAA TCAATCTGCA AAAACGATGA CTCAACAAGA GTTACCGCCT 
GATAATTTTG ATGACGATAT TCCATTCTGA 

 

Protein sequence

MAGINKVIIV GNLGADPEVR TMPNGEAVSN ISVATSESWT DKTTGEKREL TEWHRIVFYR 
RQAEIVGEYL RKGSKVYVEG RLKTRKWQDQ NGQDRYTTEI QGDVLQMLDS RNVANSVEGQ 
ASYQATNQSA KTMTQQELPP DNFDDDIPF