Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1686 |
Symbol | apbE |
ID | 4241213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1912526 |
End bp | 1913575 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105272 |
Product | thiamine biosynthesis lipoprotein |
Protein accession | YP_719891 |
Protein GI | 113461822 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA AATTATTATT AAATTTAATA AATATATTTG CGTTGGTATT TTTACTTAGT GCTTGCCAAA AAGAAGCTGA GTTAGTGTCA TTAAATGGTA GAACCATGGG TACAACTTAC CATATCAAAT ATATTGATGA GGGCAAGACT AAGTTAAGTG TACAAAAAAT GCACGAAGGC ATTGAAGGTA TCTTACAAGA TGTAAATGCT AAAATGTCCA CTTATATTCC TAATTCAGAG TTAAGTGTGT TCAACAAAAA CAAGGAGATA AATAATCCCA TTGAAATTTC CGCAGATTTG GCTTTTGTAG TTGCTGAAGC AATAAAGTTA AATCAAATTA CTCAAGGTGC TCTAGATGTA ACAGTTGGTC CTATTGTGAA CTTATGGGGT TTTGGACCGG AAAAACGGGT AGAAAAAGCA CCCACACCGG AACAAATAGC TGAACGAAAA GCCTGGGTAG GTATTGAGAA AGTTAGACTA ACACAAAAAG ACAATAAATT CTTTTTGACC AAATCTGTGC CGCAGATTTA TATTGATTTA TCTTCTATTG CTAAAGGTTT TGGTGTCGAT AAAGTTGCTG ATTATATTGC TGAGCAAGGT ATTACTGACT ACTTAGTGGA AATTGGCGGT GAGATTCGAG CAAATGGTCA TAATGCTGAA AATAAAGCTT GGCAAATAGC TATTGAAAAG CCAACCTTTG ATGGAACTCG ATCTGTATCA CAAGTTGTCG GTTTACAAGA TTTGGCTATG GCAACTTCCG GGGATTATCG CAATTATTTT GAGCAAGATG GAAAACGTTT TTCCCATGAA ATAGATCCTA CAACTTGCCA GCCCGTTCAG CATAATTTAG CCTCAATTAC AGTCTTATCT AAAAGTGCTA TGACTGCAGA CGGCTTATCC ACAGGTTTAT TTGTTTTAGG TGCGGAAAAA GCACTGGAAA TTGCTGAGCA AAATGATTTA CCTATTTATT TAACGGTCAA AACTCCACAA GGGTTTGAAA ATAAAATGTC CTCTAAATTT GCTGAAATAT TATCAACTCA GAAAAAATAA
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Protein sequence | MTKKLLLNLI NIFALVFLLS ACQKEAELVS LNGRTMGTTY HIKYIDEGKT KLSVQKMHEG IEGILQDVNA KMSTYIPNSE LSVFNKNKEI NNPIEISADL AFVVAEAIKL NQITQGALDV TVGPIVNLWG FGPEKRVEKA PTPEQIAERK AWVGIEKVRL TQKDNKFFLT KSVPQIYIDL SSIAKGFGVD KVADYIAEQG ITDYLVEIGG EIRANGHNAE NKAWQIAIEK PTFDGTRSVS QVVGLQDLAM ATSGDYRNYF EQDGKRFSHE IDPTTCQPVQ HNLASITVLS KSAMTADGLS TGLFVLGAEK ALEIAEQNDL PIYLTVKTPQ GFENKMSSKF AEILSTQKK
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