| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1612 |
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| Symbol | rfaF |
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| ID | 4241139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1826631 |
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| End bp | 1827671 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105198 |
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| Product | ADP-heptose--LPS heptosyltransferase II |
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| Protein accession | YP_719817 |
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| Protein GI | 113461748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TCGTAATTGG ACCTTCTTGG GTGGGTGATA TGATTATGTC ACATAGCCTA
TATCAAACCT TAAAACAACA ATATCCTGAT TGCCTGATTG ATGTATTGGC ACCGAATTGG
TGTAAGCCTT TACTTGCACG TATGCCGGAG GTTCGCAATG CTATTACCAT GCCGATTGGG
CATGGTTCCT TTGACTTAAA AGGGCGGTAT CGAATTGGTA AATCTTTGCG TAATCAATAT
GATATGGCGA TTGTCTTGCC AAATTCCTTG AAATCGGCTT TTATTCCTGC TTTTGCGAAA
ATTCCTGTAC GCCGTGGTTG GATAGGAGAA AGTCGTTATT TTTTGTTAAA TGATTGGCGT
CGCAATAAAA ACGACTATCC GATGATGGTA CAGCGTTATG TGGCATTGGG TTATGATAAA
ACCGTATTGC CGACAGCAAA ACATTTAGCC ATTCCTAAGC CTTATTTGCA AGTTGATGCT
CAAGAGTTGG AACAAACTTT AGAAACTTTT GCAAAACAAA CCGCACTTTG TACAAATCGT
CCGGTAATTG GGTTTTGTCC TGGTGCAGAA TTTGGACCTG CAAAGCGTTG GCCACATTAT
CATTACGCCG ATTTAGCCCG ACAGTTAATT GAACAGGGCT ATGCCGTTCG TTTATTCGGT
TCGGCGAAAG ATAAAGAGGT AGGTGAGCAA ATTAGTCAAG CGTTGCCTCA AAAATTACAA
CATTATTGTG TAAATCTTGC TGGTGAAACA GACTTAAATC AAGCTGTTGA TTTGATTTCA
GATTGTGTGG CAGTAGTGAG TAATGATAGC GGTTTAATGC ATATTGCCGC CGCACTTAAC
AAACCTTTGG TTGCTGTTTA TGGACCAACA AGTCCGGAAT ACACGCCGCC ACTTTCCGAC
AATGCTGTGA TTATTCGTCT AATTGGGGGA GGCTTGATTA AAGTGCGTAA AAGTCAAGAT
AGCTCGGAAG GTTATCACCA AAGTTTAATC GACATTACAC CGCAAATGGT CATCGAAAAA
TTACAGGATT TTTTAAATTA A
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| Protein sequence | MKILVIGPSW VGDMIMSHSL YQTLKQQYPD CLIDVLAPNW CKPLLARMPE VRNAITMPIG
HGSFDLKGRY RIGKSLRNQY DMAIVLPNSL KSAFIPAFAK IPVRRGWIGE SRYFLLNDWR
RNKNDYPMMV QRYVALGYDK TVLPTAKHLA IPKPYLQVDA QELEQTLETF AKQTALCTNR
PVIGFCPGAE FGPAKRWPHY HYADLARQLI EQGYAVRLFG SAKDKEVGEQ ISQALPQKLQ
HYCVNLAGET DLNQAVDLIS DCVAVVSNDS GLMHIAAALN KPLVAVYGPT SPEYTPPLSD
NAVIIRLIGG GLIKVRKSQD SSEGYHQSLI DITPQMVIEK LQDFLN
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