| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1610 |
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| Symbol | dapF |
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| ID | 4241137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1824790 |
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| End bp | 1825614 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105196 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_719815 |
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| Protein GI | 113461746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTT CCAAAATGCA CGGACTGGGG AATGATTTTG TTGTGGTAGA TGCTGTCACT
CAAAACGTTT ATTTTCCCAC TGAAGTCATA AAAAGATTGG CAGATCGCAA TCGTGGTATT
GGTTTTGATC AATTGCTAGT CGTTGAACCG CCTTATGATC CGGATTTGGA TTTTCACTAT
CGTATTTTCA ATGCGGACGG TAGTGAAGTT TCGCAATGTG GCAATGGTGC AAGATGCTTT
GCTCGTTTTG TCGTGCTTAA AGGTTTAACC GATAAAAAAG AAATTGCCGT GAGTACTGCA
AAAGGCAAAA TGATGTTACG TGTTAAAGAC GATGACATGG TATGTGTCAA TATGGGTGAA
CCGATTTGGG AACCGAATAA AATCCCTTTT AACGCCAATA AATTTGAAAA AAATTATATT
ATTCGCACAG ACATACAAAC CTTGCTATGT GGTGTGGTAT CTATGGGCAA TCCACATTGT
GTAACACAAG TGGAAGATAT TCAACACGCA AACATCGAAA TATTAGGACC GCTCTTAGAA
AGCCATGAAC GCTTTCCTGA ACGTGTAAAT GCCGGTTTTA TGCAAATTAT CAACCGCAAT
CATATTAAAC TGCGTGTGTA TGAACGAGGA GCAGGAGAAA CACAAGCCTG TGGAAGTGGT
GCGTGTGCAG CGGTTGCTGT CGGAATTATG CAAGGTGTGC TAGATAATAA CGTACAAGTC
GATTTGCCGG GAGGAAGGTT AATGATTGAA TGGCAAGGAA AAGGACACCC ACTTTATATG
ACCGGCGAGG CAACACATAT TTATGACGGC GTTATCCGTT TATAA
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| Protein sequence | MQFSKMHGLG NDFVVVDAVT QNVYFPTEVI KRLADRNRGI GFDQLLVVEP PYDPDLDFHY
RIFNADGSEV SQCGNGARCF ARFVVLKGLT DKKEIAVSTA KGKMMLRVKD DDMVCVNMGE
PIWEPNKIPF NANKFEKNYI IRTDIQTLLC GVVSMGNPHC VTQVEDIQHA NIEILGPLLE
SHERFPERVN AGFMQIINRN HIKLRVYERG AGETQACGSG ACAAVAVGIM QGVLDNNVQV
DLPGGRLMIE WQGKGHPLYM TGEATHIYDG VIRL
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