Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1608 |
Symbol | rseC |
ID | 4241135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1823621 |
End bp | 1824124 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105194 |
Product | positive sigma-E factor regulatory protein |
Protein accession | YP_719813 |
Protein GI | 113461744 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0389331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGGTCA ACTTCCTCTC TTTTCCGCTA AACGTATTAT TCAAGATATT CGAATTAAAT AGGTTTTTTA TGCTAACAGA AAGAGCGATA GTCATTGCTT ATCATCAAGG AAAAGCAACA GTGAAATGTC AAAGCAAAAA TGCTTGTAGC CAATGTACAG CAAAAAATAC TTGCGGAACT TCCGCACTTT CTGAATTAAC CGGCAAAAGT CCGGAGCATA TCTTTATCGT TAATAGCCTG ATACCCTTAA AAATAGGTCA AATTGTTGAG CTTGGTTTAC AAGAAAGTTC TCTGATTTCT ACCGCACTTT TATTGTATAT TATTCCTTTA ATGACCTTGC TCAGTGCAAC ACTCATTGCA AACCAAATTT TTAGCCAAGA ATTGTGGGGT GCAATTTTTA TCCTTTTTTG TACCGCACTT TCTTTTGTGC TTATCCATTC ATACAGTAAA AAATGGCAAC ATAAAAAGGC CTTTCAACCC ATTCTGTTAC GAATTATTCA ATAA
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Protein sequence | MSVNFLSFPL NVLFKIFELN RFFMLTERAI VIAYHQGKAT VKCQSKNACS QCTAKNTCGT SALSELTGKS PEHIFIVNSL IPLKIGQIVE LGLQESSLIS TALLLYIIPL MTLLSATLIA NQIFSQELWG AIFILFCTAL SFVLIHSYSK KWQHKKAFQP ILLRIIQ
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