Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1607 |
Symbol | rseB |
ID | 4241134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1822744 |
End bp | 1823682 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638105193 |
Product | periplasmic negative regulator of sigmaE |
Protein accession | YP_719812 |
Protein GI | 113461743 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000259614 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA TTTTCTCTTT TTTGACCGCA CTTCTTACTT TTTCAGTTTC AACTTTCGCT CAAGAAAATA TAGAACCTGA GCAATTATTG GAAAAAATGA TTGCAGCACA AAATACATTA AATTATGAAA TTTATTTTGT ACAAGCCACA CCAACCAATA TAGATTCACT TCGTTATCGT CATATTAATC AGGATGGCAA AAGTTACGCC CAACTTATTA CCTTAGATGG TGTTCAACAA GAAATTATCC AACATGAAAA TTTAGTGAGT TATTTTCCAC CTAATTTCCA AGCATTCTCT TTAAAGAGCG GTCATATTAT GGATAACTTA CCTGTTGTAA TGTGGAGTGA TGTTAAGCAA TTATCAGATT ATTACGATAT CGTAACCATT GGGCGTAATC GTGTGGCGGA TCGCATTGTA CAAACTTTAC GTATTTTGCC TAAAGACGAT TTTCGCTATC AATATTTAGT CTTTATCGAT GAACAAAATC ATTTGTTACT ACGCAGTGAT ATGTTGGATC GTGAAGGCAA TTTATTAGAG CAGTTCCGAG TAGTTAATTT ATATCTTGGT GATGAACTGA TCGAATTAGG TAGCTATATA GATAATGTCA TTTTTCCTCC GTTATTAAGT GAGCCGAAAA CTCAACAACA AAATTGGAAA CCGGAGTGGC TCCCAAAAGG GTTTAAGTTA ATTAGCCAAT CCATAACAAT AGAAAAAGAC AATAAACACC CTATTGAGAG CCAATTTTAT AGTGACGGAC TATTTTCTTT TGCACTCTAT TTGTCTAACA GCATTGTTGA TAATGACGGA GAAAGATTTT GGAAGCAAGG CTCCACCACT TTTTACAGCA ACACTCGAGG TAACAAAGAA TTAACCTTTG TCGGTCAACT TCCTCTCTTT TCCGCTAAAC GTATTATTCA AGATATTCGA ATTAAATAG
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Protein sequence | MLKIFSFLTA LLTFSVSTFA QENIEPEQLL EKMIAAQNTL NYEIYFVQAT PTNIDSLRYR HINQDGKSYA QLITLDGVQQ EIIQHENLVS YFPPNFQAFS LKSGHIMDNL PVVMWSDVKQ LSDYYDIVTI GRNRVADRIV QTLRILPKDD FRYQYLVFID EQNHLLLRSD MLDREGNLLE QFRVVNLYLG DELIELGSYI DNVIFPPLLS EPKTQQQNWK PEWLPKGFKL ISQSITIEKD NKHPIESQFY SDGLFSFALY LSNSIVDNDG ERFWKQGSTT FYSNTRGNKE LTFVGQLPLF SAKRIIQDIR IK
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