Gene HS_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1597 
SymboluxuR 
ID4241124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1812682 
End bp1813440 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID638105183 
ProductGntR family transcriptional regulator 
Protein accessionYP_719802 
Protein GI113461733 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00340794 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAT CACCTGAAGA ACTACGTTCT TATAAAAAAA TAGGGCAAGA ATTAAAAGCG 
GAATTATTGA GAAGAACTTA TGGTATTGGG GATAAATTAC CGGCAGAGCG TGATTTATCT
CAGTACTTCA ATGTCAGTCG TACTGTTATT CGTGAAGCAC TTATCATGCT TGAACTTGAG
AATTTAGTCG AAGTGCGGAA AGGATCTGGT GTTTATGTAA TAAATTTACC TAAATCGAGT
TCAGAGGAAA CTGAAGATTT GCCTGATGTT GGACCCTTTG AATTGCTACA GGCAAGACAG
TTGTTAGAAA GTAGTATTGC AGAATTTGCA GCTATTCAAG CAACTCGAGC TGACGTTTTA
CGCTTAAAAG AGATTTTAGA TCGTGAACGT AGAACTTTAG AGTGCGGTGA TGATGAAGAT
TATATTGCAG ATGAGGATTT TCACAAAGCA ATTGCAGAAA TAACGCAAAA TGAAGTAGTG
ATCCGCATGC AAAAGGATTT GTGGGAGTAC CGAATTAATA GTCCTATGTG GAAAGGTCTG
CATGCACATA TCTCTGATCA AAGTTACCGC TATTTATGGT TAAAAGATCA CGAAAATATT
ATTGTTGCAA TACAGCGAAA AAATCCTGTA TTAGCACGAA AAATGATGTG GCAGCATTTG
GAAAATGTAA AACAGAAACT GTTTGAATTA TCGGATTTAG ATGATCCTAA TTTTGATGGT
TATCTGTTTA ATGTTAGCCC TTTGGCTGCT GATTTTTAA
 
Protein sequence
MATSPEELRS YKKIGQELKA ELLRRTYGIG DKLPAERDLS QYFNVSRTVI REALIMLELE 
NLVEVRKGSG VYVINLPKSS SEETEDLPDV GPFELLQARQ LLESSIAEFA AIQATRADVL
RLKEILDRER RTLECGDDED YIADEDFHKA IAEITQNEVV IRMQKDLWEY RINSPMWKGL
HAHISDQSYR YLWLKDHENI IVAIQRKNPV LARKMMWQHL ENVKQKLFEL SDLDDPNFDG
YLFNVSPLAA DF