Gene HS_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1590 
SymbolkdtA 
ID4241117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1805738 
End bp1807018 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content38% 
IMG OID638105176 
Product3-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_719795 
Protein GI113461726 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCTT TTTTTTATAC CTCAATAATG TACTGTATTC AGCCATTTGT CTTGGTGTAT 
AACCTTATAC GCAGTTTTAA GTCGCCGAAT TATCGAAAAC GTATTTTAGA ACGTTACGCT
TTTTATCCTT CGCTGACTGA ACCGAAGCCG AATGGGGTTG TGATTCATGC GGCTTCTGTG
GGGGAAGTGA TTGCGGCAAC TCCTTTAGTT AAAAAGATAC AACAGCAATA TCCACATTTA
TCTATAACGT TTACAACGGT GACACCAACG GGATCAGATC GTGTCAAAGC CGCTTTTGGT
CAATCCGTCT TCCATGTTTA TTTACCTTAT GATTTACCCG ATGCAATTTT GCGTTTTATT
GATTTTGTAA AACCGAAAAT GTGCATTGTG ATTGAAACGG AAATTTGGCC GAATTTAATT
AAACAATTAT ATTTACGAGA TATTCCTTTT GTTATTGCTA ATGCAAGATT GTCTGAACGT
TCGGCAAAAC GCTATGGCTG GGTTAAAGCA CAATTACAAA ATATGTTTAG TCAGATTAGC
CTGATTGCAC CGCAAGACGA GGTAAGCCTG CAGCGTTATA TTGATTTGGG CTACAATCCG
TCAAAATTAA AATTGACGGG AAATATCAAA TATGACTTAG TGGTGAATGA TGAATTAGTG
CAAAAAATTA CCGCACTTCG CCAATCTTGG AGTCAAAATC GCCCGATTTG GATTGCGGCA
AGCACCCATG AGGGCGAGGA AGTTATTATT TTGCAGGCTC ATCAAAAGTT GCTAAAAACT
TATCCGCAGT TGTTATTAAT TTTAGTACCT CGTCATCCTG AACGTTTTAA CCTTGTCGCA
GAGTTAATTG AAAAGCAAAA GCTTAACTAT ATTCGCCGTT CTGCACATGT TAATCCCGAT
TTATTAACAC AGGTTGTACT TGGAGATACC ATGGGGGAGT TGATGTTAAT GTACGGTATT
TCCGATATTG CCTTTGTGGG GGGAAGTTTA GTCAAGCATG GGGGGCATAA TCCTTTAGAG
CCTCTCACTT TTAAGTTACC TGTGATTAGC GGTCAATATA CTTTTAATTT TCCGGTGGTT
TACCAAAACT TATCAGAGGT TCAAGGGGTA GTGTTAGTCA ATGAAAATAG CCAAGAGCTG
GAAAGTGCGG TAAAAAATTT GTTATCTTCT CCTGAATTAT GTGAACGCTA TGGTAATGCT
GGTTATGAAG TATTGGTCCA AAATCGTGGT GCATTACAAC GACTATTTGA ATTACTACAG
CCTTATTTGG AGAAAGAATA A
 
Protein sequence
MWSFFYTSIM YCIQPFVLVY NLIRSFKSPN YRKRILERYA FYPSLTEPKP NGVVIHAASV 
GEVIAATPLV KKIQQQYPHL SITFTTVTPT GSDRVKAAFG QSVFHVYLPY DLPDAILRFI
DFVKPKMCIV IETEIWPNLI KQLYLRDIPF VIANARLSER SAKRYGWVKA QLQNMFSQIS
LIAPQDEVSL QRYIDLGYNP SKLKLTGNIK YDLVVNDELV QKITALRQSW SQNRPIWIAA
STHEGEEVII LQAHQKLLKT YPQLLLILVP RHPERFNLVA ELIEKQKLNY IRRSAHVNPD
LLTQVVLGDT MGELMLMYGI SDIAFVGGSL VKHGGHNPLE PLTFKLPVIS GQYTFNFPVV
YQNLSEVQGV VLVNENSQEL ESAVKNLLSS PELCERYGNA GYEVLVQNRG ALQRLFELLQ
PYLEKE