Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1574 |
Symbol | potE |
ID | 4241101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1785893 |
End bp | 1787203 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638105160 |
Product | putrescine transporter |
Protein accession | YP_719779 |
Protein GI | 113461710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTC AAAAAAGTAA TAAAATCGGT GTAGTACAAC TCACTATACT GACAATGGTA AATATGATGG GTTCAGGCAT TATCATGCTA CCGACAAAAT TAGCTGAAAT TGGAACTATC TCAATTGTAT CTTGGTTAGT CACAGCTGTT GGTTCAACTG CTTTAGCCTA TGCTTTTGCT CAATGTGGTA TGTTCAGTAA AAAATCAGGC GGTATGGGTG GTTATGCGGA ATATTCTTTC GGTAAAGCCG GTAACTTTAT GGCAAACTAC ACTTATGGGG TTTCTCTAGT CATTGCCAAT ACTGCGATTG CAATATCCGC CGTTGGATAC GGATCAGAGC TATTAAATGT CACTTTATCA CCGATATCCA TTGCACTATG CACTATATTC ACACTATGGT TAGCAACTGT TTTGAATTTT GGTGGGGCAA GAATCACTGG TAACATCAGC TCTTTTACTA TCTGGGGAGT AATTATTCCG GTCGTAGGGA TTTGTTTAAT TGGTTGGTTC TGGTTTAGTG GTGAAATGTA TGTCAGTGCT TGGAACCCAC ATAACGTTCC CACTTTTGAA GCCATCGGCG TATCTATTTC TATGACGTTA TGGGCCTTCT TAGGTTTAGA GTCAGCTTGT GCGAATACTG ATGTAGTAGA AAATCCTGAA AGAAATGTTC CTATCGCAGT TCTTGGCGGA ACATTAGGTG CGGCGGTTAT TTATATTGTT TCCACCAACG TAATTGCCGG TATTGTTCCT AATTTGGAAC TTGCTAATTC AACAGCACCG TTCGGTTTAG CTTTTGCACA TATGTTTGAA GAAACAACAG GTAAAGTGGT AATGGGCTTA ATGGTAATGT CCTGCTTCGG TTCATTATTA GGCTGGCAGT TTACCATTGC TCAAGTATTC AAATCTTCAG CCGAAGAAGG ATATTTCCCA GCATTCTTCA AAAAAGTGAC CAGTAAAAAC GCACCTATTA TTGGTATGGT TACAATTACT GCAATTCAAA GTTTATTAGC ACTGATGACT ATCAGTCCAT CTTTAAACAA ACAATTTAAC ATCTTGGTAG ATTTGGCGGT GGTGACCAAC GTAATACCTT ATCTGTTATC AATGGCTGCA TTAATGGTCT TACTTAAAGT AGAAAAAGTA GCATTAAATA AAGCTAAAAT TACCACATTT GTTGCCTTCA TCGGTTCGTT ATATAGTTTA TATGCCTTAT ACGCAGCAGG TGAGCAAGCT ATGCTATACG GATCAATCGT AACATTCATC GGTTGGACAC TATATGGATT TATTTCTTAT AAATTTGATA TAAAAAAATA A
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Protein sequence | MSTQKSNKIG VVQLTILTMV NMMGSGIIML PTKLAEIGTI SIVSWLVTAV GSTALAYAFA QCGMFSKKSG GMGGYAEYSF GKAGNFMANY TYGVSLVIAN TAIAISAVGY GSELLNVTLS PISIALCTIF TLWLATVLNF GGARITGNIS SFTIWGVIIP VVGICLIGWF WFSGEMYVSA WNPHNVPTFE AIGVSISMTL WAFLGLESAC ANTDVVENPE RNVPIAVLGG TLGAAVIYIV STNVIAGIVP NLELANSTAP FGLAFAHMFE ETTGKVVMGL MVMSCFGSLL GWQFTIAQVF KSSAEEGYFP AFFKKVTSKN APIIGMVTIT AIQSLLALMT ISPSLNKQFN ILVDLAVVTN VIPYLLSMAA LMVLLKVEKV ALNKAKITTF VAFIGSLYSL YALYAAGEQA MLYGSIVTFI GWTLYGFISY KFDIKK
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