Gene HS_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1563 
Symbol 
ID4241084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1761577 
End bp1762494 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content41% 
IMG OID638105143 
Producthypothetical protein 
Protein accessionYP_719768 
Protein GI113461699 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000159898 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATAATTTTTT TAAATACTCT GCCTTAGCAA TGGCGTTGAG TTTGGGTGCC 
GGTAGTGTGG CGTTGGGGCA GGAGCAGCCA AAACTTACTC CTAAAGAAGT GTATCAACTC
CTGCAGAGAG ATGGAGCTGG ATCGCCAGCT GCATTAGAAT ATTTAATTAA AGGCGTCCAA
GAATTTGCAG ACGATGCAAT GTATATTATG GACAAGCAAG ATAAAAGACT CAGCAAACGC
ATTAAAACAT TACGAGAAGA TACCAATATA TTATTTAGTA ATATGGATGC TTTAGTTAGC
AATCATATTG ATGAAACAAC AGAAAATATT GCAAAACTAG ACAAGGAGAT TCGTGCAAAT
AAAAAAGAGG CTGAAGAAAC ATTCGCCGCT ATGGATGAGT TTGTTAGTAA CCATATAGAC
CAATTAGGTT CTGAAATTGA TAACAACAAA GAAAACATTC AAGCCAATAC TAACAATTTA
ACCACGCTTA AGGCTACAGT CGAAACTAAC ACCACAGGCT TAGCTGATTT AACGCCTAAA
GTCGATGCCA ATACCCTTGG TTTAGCCACT CTCCGCACTA AAGTCGAAAC TAACACCACA
GGCTTAGCTG GTTTAACGCC TCAAGTCACT GCCAACACTG CAGGCTTAGT CAATGTGAAT
AAACGTGTCG ATACTCTCGA CAAAAACACC AAAGCCGGTA TCGCTTCTGC GGTCGCTTTA
GGTATGTTGC CACAATCCAC TGCTCCGGGT AAATCATTAG TGAGCTTAGG TGTCGGTCAT
CACCGTGGGC AAAGTGCTAC TGCTATTGGA GTATCTTCTA TGAGCAGTAA CGGTAAATGG
GTTGTTAAAG GCGGTATGAG CTATGATACA CAGCGTCATG CTACTTTCGG CGGTTCTGTC
GGCTTTTTCT TTAACTAA
 
Protein sequence
MKKHNFFKYS ALAMALSLGA GSVALGQEQP KLTPKEVYQL LQRDGAGSPA ALEYLIKGVQ 
EFADDAMYIM DKQDKRLSKR IKTLREDTNI LFSNMDALVS NHIDETTENI AKLDKEIRAN
KKEAEETFAA MDEFVSNHID QLGSEIDNNK ENIQANTNNL TTLKATVETN TTGLADLTPK
VDANTLGLAT LRTKVETNTT GLAGLTPQVT ANTAGLVNVN KRVDTLDKNT KAGIASAVAL
GMLPQSTAPG KSLVSLGVGH HRGQSATAIG VSSMSSNGKW VVKGGMSYDT QRHATFGGSV
GFFFN