Gene HS_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1562 
Symbolmtr 
ID4241083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1759927 
End bp1761177 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content37% 
IMG OID638105142 
Producttryptophan-specific transport protein 
Protein accessionYP_719767 
Protein GI113461698 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000304843 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AAATCCCTTC TTTATTTGGT GGTGCAATGA TTATTGCCGG AGGAACTATC 
GGTGCAGGAA TGTTAGCCAA TCCTACTTCA ACTGCGGGTG TATGGTTTTT AGGTTCAACA
TTAATCTTAA TTTATACTTG GTTTTGTATG ACAACATCAG GGTTGATGTT ACTTGAGGCA
AATCTACATT ATCCTACTGG TGCCAGTTTT GATACTATTG TCAAAGATTT ATTAGGGAAA
GGTTGGAATT TGATTAATGG TGTGTCTGTC GCGTTTGTAC TTTATATTTT AACCTATGCT
TATATCACTT CAGGCGGTGG GATTACGCAA GGTTTTTTTA ATCAATTGTT AAGTAGTACA
GAAAGTGCGG TAGATATTGG GCGTAGTTCC GGATCGCTTA TCTTTTGTAT TGTGCTGGCA
TGGTTTGTAT GGTTTTCCAC TAAAGCTGTT GATCGTTTCA GTGTGGTATT AATTGCAGGA
ATGGTCATTT CCTTTTTCCT CTCTATAACC AATTTGGTCG GTTCGGTAAA TACAGAAGTA
TTGCTAAATG CTGTACAAGG TGAACAACAA TATTTGCCTT ATGCGTTGGG GGCGTTACCT
GTTTGTTTGG TTTCTTTTGG CTTTCATCAA AATGTTCCCA GTTTGGTGAA ATATTATGAT
CGCAATGCAA GTCAGGTTTT AAAAGCGATT TTCATAGGTA CAGGCATTGC ATTAGTGATT
TATATCTTGT GGCAGTTGGC TATTCAGGGA AATTTACCAA GATCTGAATT TATACCAGTC
ATTGAAAAGG GCGGTGATAT TTCAGCATTA TTAGACGCAT TAAGTAAATA CTTACAAACG
GATTATATAG CACTTACACT GAAATTTTTT GCTTATATGG CAATTGCAAG TTCATTCTTA
GGTGTAACGT TAGGGTTATT TGATTATATC GCTGATTTAT TTAAATTTGA TGATAGTGTT
GCTGGACGCA CTAAAACAGC GTTAATTACG TTTTTACCGC CATTATTATT GAGCTTACAA
TTTCCTTACG GCTTTGTATT AGCCATTGGT TATGCTGGTT TAGCAGCAAC AATCTGGGCG
GTAATTGTAC CGGCTTTATT AGCGAAAGCC AGTCGTAAGA AATTCAAAAG TAGCAGTTTT
ACCGCTTACG GTGGAAATTT TATGATATAT TTCGTCATCG CATTTGGTTT ATTAAATATC
TTCGCACAAC TTGCAATGCA GTTCGGTTTT TTACCGGAGT TTAGAGGCTA A
 
Protein sequence
MTKKIPSLFG GAMIIAGGTI GAGMLANPTS TAGVWFLGST LILIYTWFCM TTSGLMLLEA 
NLHYPTGASF DTIVKDLLGK GWNLINGVSV AFVLYILTYA YITSGGGITQ GFFNQLLSST
ESAVDIGRSS GSLIFCIVLA WFVWFSTKAV DRFSVVLIAG MVISFFLSIT NLVGSVNTEV
LLNAVQGEQQ YLPYALGALP VCLVSFGFHQ NVPSLVKYYD RNASQVLKAI FIGTGIALVI
YILWQLAIQG NLPRSEFIPV IEKGGDISAL LDALSKYLQT DYIALTLKFF AYMAIASSFL
GVTLGLFDYI ADLFKFDDSV AGRTKTALIT FLPPLLLSLQ FPYGFVLAIG YAGLAATIWA
VIVPALLAKA SRKKFKSSSF TAYGGNFMIY FVIAFGLLNI FAQLAMQFGF LPEFRG