| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1543 |
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| Symbol | |
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| ID | 4241064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1740598 |
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| End bp | 1741956 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638105123 |
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| Product | outer membrane protein |
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| Protein accession | YP_719748 |
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| Protein GI | 113461679 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.316973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TACAATTTTT TAAATATTCA TCATTGGCAT TAGCATTGGG TTTAGGGGTA
AGTGCTTCTG CTTTGGCAGC CCCAACAAGT ACAAGTACGA CTACTGGACC AGAGGCGCCT
CCTACAGGCC CTGCTCCTAC GGCGAAAGAC CCTCTAGCAG AAACAGCGTT AGCCTATGAT
TTGGAGAACG AAGTTGCGTA TCTTCGTATG AAGGCGGGTG AGTGGATGCA ATTGGGGCTT
GATCCTGAAA AAGAAGTCAT CAAAGGCTGG AATGAGGTAA AATCTCTCCC TCGTATCGAT
GGAAATGGAA AGGATAAACA GACAAAAGAT CAAATAGCAA TGTTGATAAG AACGGTTGAT
AATACAAAAG AGCTTGGTCG GATCGTTAGT ACAAACATTG AAGATATTAA GAACCTTAAA
AAAGAGCTTT ACGGTTTTGT AGAAGATGTG AACGAGAGTG AAGCACGCAA TATCTCAAGA
ATAGATGAGA ATGAGAAAGA TATTAAGAAC CTTAAAAAAG AGCTTTACGA TTTTGTAGAA
GATGTGAACG AGAGTGAAGC ACGCAATATC TCAAGAATAG ATGAAAATGA GAAGGACATT
AATACTCTTA AAGAGCTAAT GGATGAGGAT TTAAATTCAG TCTTAACCCA AATTGAAGAT
GTAAAACTCA CATTTCAAGA TGTCAATGAT AACGTTAATT TGGCATTTGA AGAGATTAAT
GGAAATGCCC AAAAGTTTGA CACTGCTATT GAAGGACTTA CTTCAGGTTT GAGCGATTTA
CAAGCTAAAG TCGATGCAAA TAAACAAGAA ACTGAAGACG ATATTGCGGA CAATGCCAAG
GCTATTCATA GCAACACAAA AGGTATTGCT AAAAATACCA AGGATATTCG TGACTTGGAC
ACCAAAACCA AGCAAATGTT GGAAAATGAC AAAAACTTGA TGACCGGTTT AGAATCTTTA
GCAACAGAAA CAAGCAAAGG CTTTGAAAGA TTTGATGTCA AAACACAACA ATTAGATCAA
GCCGTCGCAA ATGTCGTCGG TCGAGTAGAC ATAACTGAGC AAGCTATTCG CCAAAACACT
GCAGGCTTAG TCAATGTGAA TAAACGTGTC GATACACTCG ACAAAAACAC CAAAGCCGGT
ATCGCTTCTG CAGTCGCTTT AGGTATGTTG CCACAATCCA CTGCTCCGGG TAAATCATTA
GTGAGCTTAG GTGTCGGTCA TCACCGTGGG CAAAGTGCTA CTGCTATTGG AGTATCTTCT
ATGAGCAGTA ACGGTAAATG GGTTGTTAAA GGCGGTATGA GCTATGATAC ACAGCGTCAT
GCTACTTTCG GCGGTTCTGT CGGTTTTTTC TTTAACTAA
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| Protein sequence | MKKVQFFKYS SLALALGLGV SASALAAPTS TSTTTGPEAP PTGPAPTAKD PLAETALAYD
LENEVAYLRM KAGEWMQLGL DPEKEVIKGW NEVKSLPRID GNGKDKQTKD QIAMLIRTVD
NTKELGRIVS TNIEDIKNLK KELYGFVEDV NESEARNISR IDENEKDIKN LKKELYDFVE
DVNESEARNI SRIDENEKDI NTLKELMDED LNSVLTQIED VKLTFQDVND NVNLAFEEIN
GNAQKFDTAI EGLTSGLSDL QAKVDANKQE TEDDIADNAK AIHSNTKGIA KNTKDIRDLD
TKTKQMLEND KNLMTGLESL ATETSKGFER FDVKTQQLDQ AVANVVGRVD ITEQAIRQNT
AGLVNVNKRV DTLDKNTKAG IASAVALGML PQSTAPGKSL VSLGVGHHRG QSATAIGVSS
MSSNGKWVVK GGMSYDTQRH ATFGGSVGFF FN
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