| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1474 |
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| Symbol | recJ |
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| ID | 4240994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1665695 |
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| End bp | 1667416 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638105055 |
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| Product | single-strand DNA-specific exonuclease |
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| Protein accession | YP_719684 |
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| Protein GI | 113461615 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAGT TTATTAAACG ACGTGATGTT GCGATAGATG TTCAAGTTTG TGAACATCCT
TTATTGGACC GAATTTACCG TGCACGTCAA ATTAAAAATC CTCAACAATT AGACCGCACT
TTGAAATCTA TGTTGGCACC TGATTTGCTA CATGGTATTG GAAGTGCGGT GGATTTATTG
GTAACAGCGA GAGAAAAACA ACAAAAGATT GTTATTGTCG GTGATTTTGA TGTTGACGGA
GCAACCAGCA CAGCACTCAT TGTTTTGGCT CTTCGTCAAC TTGGGTTCAC AGATGTAGAT
TATTTAGTAC CTAATCGCTT TGAGCAAGGT TACGGTTTAA GCGTGGAAGT AGCTAAATTA
GCATTAGAAA AAAATGTTGA GTTATTGATT ACAGTAGATA ATGGGGTATC TTCTTTTGAT
GGTGTTGTGT TTTTAAAAAA TGCGGGAGTG CAAGTGTTGA TTACAGATCA CCACTTACCG
CCGGAAATAT TGCCTCCTGC CCATGCTATT GTTAATCCAA ATCTTACACA ATGTAATTTT
CCTTCAAAAT TTCTTGCTGG TGTCGGTGTC GCTTTTTATG TCATGCTGGC ATTGCGTGCA
AAATTACGTG ATTTAGGGAT TTTTACTACG CAAACCCAAC CGAATTTTAC AGAGTTATTA
GATTTAGTTG CCCTTGGTAC AATTTCCGAT GTGGTACCGC TTGATCAAAA TAATCGTATT
TTAGCTTATC AAGGTTTAGC CAGAATTCGA GCTGAGCGTT GTCGTCCCGG TATTCGTGCT
TTGGCGGAAA TTGCAAATCG TAATATGAGT CGATTGACCG CTTCCGATTT AGGCTTTTCT
ATTGGTCCAA GATTGAATGC TGCCGGGCGT TTGGACAATA TGTCTGTTGG TGTGGAGTTA
TTATTGGCCG ATGATATGCA ACATGCTCGT CAATTAGCTT TTGAATTAGA TAGTTTGAAT
CAGGCTCGTA AAGAAATTGA GCAAGGTATG AAACAGGAAG CGTTAGAAAT TTGTCGGAAT
TTGACCGCAC TTTCTAAGCA ATTACCGCTG GGCATCGTAC TATATCAGGT TGATTGGCAT
CAAGGTGTAC TCGGTATTTT GGCTTCTCGA ATTAAAGATA AATTTCATCG ACCGACCATT
GCGTTTGCTC AGGATCAAGT CGGAATTTTA AAAGGTTCAG CACGATCTAT TGAAGGTTTA
CATATGCGTG ATGTGTTAGA GCGTATTCAT TCTCGCTATC CGAATATGAT TTTAAAATTT
GGTGGTCATG CGATGGCTGC AGGGTTGAGT ATTCGTGAGG AATTGTTTAC ACAATTTCAA
CAAGCCTTTA TTCAAACTGT GACTGAATGG TTAAAAGAAG AACAATTACA AGGTATTATT
TGGACTGATG GTCAATTAGC ACCCGCGTTT TTAAATTTGG AAACAGCGGA ATTACTGCGT
CAAGCCGGTC CTTGGGGGCA AGGTTTTCCA GAGCCGTGTT TTGATGGTGA ATTTACAATT
TTACGCCAGA GTATTGTGGG TGAAAAACAT TTAAAAATGC TTGTTGAGCC TAAACAAGGA
GGTCCGCTGT TGGATGCTAT TGCATTTAAT ATTGATAAGG ATTACTACCC TGATTTTTCG
ATAAAACATG CAAGAATAGC TTATAAATTA GATAGTAATG AGTTTCGTGG AAATCGTCAT
GTTCAGTTGT TGGTAGATTA TATTGAACCT TTAGATCATT AA
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| Protein sequence | MNKFIKRRDV AIDVQVCEHP LLDRIYRARQ IKNPQQLDRT LKSMLAPDLL HGIGSAVDLL
VTAREKQQKI VIVGDFDVDG ATSTALIVLA LRQLGFTDVD YLVPNRFEQG YGLSVEVAKL
ALEKNVELLI TVDNGVSSFD GVVFLKNAGV QVLITDHHLP PEILPPAHAI VNPNLTQCNF
PSKFLAGVGV AFYVMLALRA KLRDLGIFTT QTQPNFTELL DLVALGTISD VVPLDQNNRI
LAYQGLARIR AERCRPGIRA LAEIANRNMS RLTASDLGFS IGPRLNAAGR LDNMSVGVEL
LLADDMQHAR QLAFELDSLN QARKEIEQGM KQEALEICRN LTALSKQLPL GIVLYQVDWH
QGVLGILASR IKDKFHRPTI AFAQDQVGIL KGSARSIEGL HMRDVLERIH SRYPNMILKF
GGHAMAAGLS IREELFTQFQ QAFIQTVTEW LKEEQLQGII WTDGQLAPAF LNLETAELLR
QAGPWGQGFP EPCFDGEFTI LRQSIVGEKH LKMLVEPKQG GPLLDAIAFN IDKDYYPDFS
IKHARIAYKL DSNEFRGNRH VQLLVDYIEP LDH
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