Gene HS_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1455 
SymbolspoT 
ID4240976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1648889 
End bp1651012 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content39% 
IMG OID638105038 
Productguanosine-3'5'-bis(diphosphate) 3'- pyrophosphohydrolase 
Protein accessionYP_719667 
Protein GI113461598 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATTTAT TTGAGAGTTT AGAGAAAATT ATCAGAGGAT ATTTGTCTCC GTCACAAATT 
GAGTTAGTTC GGCATGCTTT TGTTATTGCA AGAGATGCTC ACGAAGGACA AGCGAGGGCT
AGTGGCGAAC CTTATATTAC TCATCCGGTT GCCGTTGCTT CTATTATTGC AGAAATGCAT
TTGGATCATG AAGCAGTGGT TGCAGCGTTA TTGCATGATG TAATTGAGGA TACGCCTTAT
ACTGAAGAGC AATTAAAAGA AGAGTTTGGT GCGAGTGTTG CTGAAATTGT GGAGGGTGTT
TCGAAATTAG ATAAATTGAA ATTTCGTACA CGTAAAGAAG CGGAAGTAGA GAATTTTCGC
AAAATGATTT TGGCAATGAC AAAGGATATT CGTGTCGTGT TGATTAAGCT AGCCGACCGT
ACTCATAATA TGCGTACACT GGGTGCTTTA AGATCGGAGA AACGCCGTCG GATTGCGAAA
GAAACCCTAG AAATTTATGC TCCTTTAGCT CATCGTTTAG GGATAGAGCA CATTAAAAAT
GAATTAGAAG ATTTAGGTTT TGAAGCAATG TACCCTCAAC GTTATGCGGT ATTACGAAAA
GTGATTCAAA TTGCTCGTGG TAATCGTAAG GATATGATTG AGTGTATCGC TTCAGATATT
AAAGGACGCT TGACGGAGGC TGGCATCACG GCACGAGTAT TTGGTCGTGA AAAACATCTT
TATGCTATTT ACCAAAAAAT GCGATTGAAA GATCAGCAGT TTCATTCCAT TATGGATATT
TATGCTTTCC GGACGGTGGT AAAGGATGTG GATACTTGCT ATCGAGTACT TGGTCAAATG
CACAGTTTGT ATAAGCCGCG TCCGGGACGG GTGAAAGACT ATATTGCTGT ACCTAAAGCC
AATGGTTATC AATCTTTGCA TACATCTATG ATTGGGCCAC ACGGTGTACC TGTTGAAGTG
CAAATTCGTA CGGAAGAAAT GGATCGGATG GCGGAAATGG GTGTGGCAGC ACATTGGGCA
TATAAGCAAT CAGGACGAAA TGACAGTACA ACGGCACAAA TTCGAGCTCA GCGTTGGTTG
CGAAGTCTTG TGGAATTACA GCAAAGTGTT GGTAATTCTT TTGAGTTTAT TGAAAGCGTA
AAATCAGAGT TCTTTCCTAA AGAAATCTAT GTATTTACCC CTAAAGGACG TATTATTGAG
TTGCCTAAAG GTGCAACTGC GGTCGATTTT GCTTATGCGG TACATACAGA TGTTGGACAT
CATTGCGTGG CAGCTACTGT TGATCGTAAA CCTTATCCGC TTTCCTTTGC ATTACAATCA
GGTCAAACGA TTGATATTAG TATCGATGAA AATTCAAAAC CAAATTCGGG GTGGCTAAAT
TTTGTTGTGA CAGCGAAAGC TCGCACAAGT ATTCGCCAAG CATTGAAATC GTTAGGTGCC
GATGATGCTG TTAATTTAGG CAAACGCCAA TTACTGCAGG CACTTTTACC TAAAAAACTT
AGTGATATTC CACCGCACAT TGTGCAAGAA GTTTTAGATG ATTTGAAATT AACGAGTTTT
AATGACTTGC TGATGGAAAT TGGTTTAGGA AATCAGATTA GTGGAGCAAT TGCTTATCGA
TTGGTGGGTG AGCCATTGAA AATTGATACG GATGGTAATC CTAAAAATAA TACGGAATTA
TTGCAAATTA AGAGCTCTGA AGGTTTATCA ACAACCTTTG GGCAATGTTG TCATCCTATT
CCGGGAGATC CAATTGTGGC TTATACGAGT TCAGGGAAAG GGCTTGTTAT TCATCATAAG
GATTGCGCTA ATTTGAAAAA ACGTAAAGAG AATACTGAAC ATTATATGCA GGTACAATGG
GAGGATGAAG ATACCTCGAT TGAGTTTGAA ACTGAGTTGC GTATTGAATT ACTAAACCAA
CAGGGTGCTT TACCTCATTT AATGTCAATG ATTTCTTCTT TGGATAGTCG CATTCATAGC
ATTTGGACGG AAGAGCAAGA CGGTCGCCTT TATCAAATTG TTATTTTATT AACCGTGAAG
AACACAGAAC ATTTGGAGCA AATTATGCGT AAGATTAAAA GTGTTCCAGG CTTTTTATCT
GTCAAACGCA ACATTAATAA TTAA
 
Protein sequence
MYLFESLEKI IRGYLSPSQI ELVRHAFVIA RDAHEGQARA SGEPYITHPV AVASIIAEMH 
LDHEAVVAAL LHDVIEDTPY TEEQLKEEFG ASVAEIVEGV SKLDKLKFRT RKEAEVENFR
KMILAMTKDI RVVLIKLADR THNMRTLGAL RSEKRRRIAK ETLEIYAPLA HRLGIEHIKN
ELEDLGFEAM YPQRYAVLRK VIQIARGNRK DMIECIASDI KGRLTEAGIT ARVFGREKHL
YAIYQKMRLK DQQFHSIMDI YAFRTVVKDV DTCYRVLGQM HSLYKPRPGR VKDYIAVPKA
NGYQSLHTSM IGPHGVPVEV QIRTEEMDRM AEMGVAAHWA YKQSGRNDST TAQIRAQRWL
RSLVELQQSV GNSFEFIESV KSEFFPKEIY VFTPKGRIIE LPKGATAVDF AYAVHTDVGH
HCVAATVDRK PYPLSFALQS GQTIDISIDE NSKPNSGWLN FVVTAKARTS IRQALKSLGA
DDAVNLGKRQ LLQALLPKKL SDIPPHIVQE VLDDLKLTSF NDLLMEIGLG NQISGAIAYR
LVGEPLKIDT DGNPKNNTEL LQIKSSEGLS TTFGQCCHPI PGDPIVAYTS SGKGLVIHHK
DCANLKKRKE NTEHYMQVQW EDEDTSIEFE TELRIELLNQ QGALPHLMSM ISSLDSRIHS
IWTEEQDGRL YQIVILLTVK NTEHLEQIMR KIKSVPGFLS VKRNINN