Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1445 |
Symbol | gpmA |
ID | 4240961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1631734 |
End bp | 1632417 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105023 |
Product | phosphoglyceromutase |
Protein accession | YP_719657 |
Protein GI | 113461588 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0868062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAG TATTTATTCG CCATGGTTTT AGTGAGTGGA ATGCCAAAAA CTTGTTTACC GGCTGGCGTG ATGTGAATTT AACAGAACGT GGTATTGAAG AAGCTAAAGC GGCAGGTAAA AAATTACTTG AAGCTGGTTA TGAATTTGAT ATTGCATTTA CCTCAGTTTT AACTCGGGCA ATTAAAACCT GCAATATCGT GTTAGAAGAA TCTAACCAAT TATGGATTCC TCAAGTGAAG CACTGGCGTT TAAATGAGCG TCATTACGGT GCTTTACAAG GGTTGGATAA AAAAGCAACT GCTGAACAGT ATGGTGATGA ACAAGTTCAC ATTTGGCGTC GTTCTTATGA TGTTTCTCCA CCGGATTTAG ATCCGCAAGA TCCGAATTCT GCACATAACG ACCGCCGTTA TGCTCTTTTA CCTAAAGACG TTGTGCCAAA TGCTGAGAAC TTAAAAATCA CTCTTGAACG TGTTCTGCCA TTCTGGGAAG ATCAAATTGC ACCCGCACTT CTTTCTGGTA AACGTGTACT TGTCACTGCA CACGGTAACT CTTTACGTGC ATTAGCAAAA CACATTATCG GTATTTCTGA TGAAGAAATT ATGGCTTTTG AAATTCCAAC TGGTCAGCCG TTAGTGTTAA AACTGGATGA ACAGTTAAAT TTTGTTGAGA AATTCTATCT ATAA
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Protein sequence | MELVFIRHGF SEWNAKNLFT GWRDVNLTER GIEEAKAAGK KLLEAGYEFD IAFTSVLTRA IKTCNIVLEE SNQLWIPQVK HWRLNERHYG ALQGLDKKAT AEQYGDEQVH IWRRSYDVSP PDLDPQDPNS AHNDRRYALL PKDVVPNAEN LKITLERVLP FWEDQIAPAL LSGKRVLVTA HGNSLRALAK HIIGISDEEI MAFEIPTGQP LVLKLDEQLN FVEKFYL
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