Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1428 |
Symbol | |
ID | 4240944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1614531 |
End bp | 1615328 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638105006 |
Product | permease |
Protein accession | YP_719640 |
Protein GI | 113461571 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.219034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTTG CGGTTATTTC AGCTTTTTTT TATTTAATTA GCATTTTATT AATCATGCCA ATGTTATTAG GGCAAGGCGG TCAAGAAGTT AAATTGAATA AAATGGCTTT TTTAGTCACC GCACTCATCG CAATTATTAG CCATTTTATT GCGTTAAATA AGTTATTTAT TCATTTGTTC ATAGGTAATA ATTTCACTTT AATTGAAATT TGCTCGTTAG TGAGTGCCAT GATTGCTGCT ATTGCAACTG TTGCCATTTT GGCTCGAGTA AAAACACTTT GGTTTCTGTT GCCTATAGTT TACTGTTTTT CTATTATCAA TTTAATTTTA CAAGCATTAT TACCTGAAAT TTGGGTTTAT CATTTAAGTC AAAATACAAG TTTATTATTC CATATTGCCT TATCTTTATT TGCATATTCC GTTTGTTTTA TTGCTATGTT GTATGCCATT CAATTACGCT GGATTGATAA TAGCTTAAAA AGTAAAAAAT TAACTTTCTC GCCGGTTGTT CCTCCATTAA TGACCGTTGA AAAACATTTC TTTCGCTCTT TGTTTAGCGG ACAAATATTA CTTACTTTGA CACTTATTTC CGGTAGCATT CAATTAATTG ATTTTTTCTC CGCTCACAAT ATTCCCAAAG CTATCTTTTC ATTTTTAGCT TGGTTTGTTT TCGGCATAGC GTTATTTGGA CATTGGAAAT TATATTGGCG AGGAAAAAGA ATGATTATTT ATACAATTTC AGGTATGATC CTGCTCACTG TCGCTTATTT CGGCAGTCGT GTTATTTTAG AGTTATAA
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Protein sequence | MWFAVISAFF YLISILLIMP MLLGQGGQEV KLNKMAFLVT ALIAIISHFI ALNKLFIHLF IGNNFTLIEI CSLVSAMIAA IATVAILARV KTLWFLLPIV YCFSIINLIL QALLPEIWVY HLSQNTSLLF HIALSLFAYS VCFIAMLYAI QLRWIDNSLK SKKLTFSPVV PPLMTVEKHF FRSLFSGQIL LTLTLISGSI QLIDFFSAHN IPKAIFSFLA WFVFGIALFG HWKLYWRGKR MIIYTISGMI LLTVAYFGSR VILEL
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