Gene HS_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1428 
Symbol 
ID4240944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1614531 
End bp1615328 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content31% 
IMG OID638105006 
Productpermease 
Protein accessionYP_719640 
Protein GI113461571 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.219034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTTG CGGTTATTTC AGCTTTTTTT TATTTAATTA GCATTTTATT AATCATGCCA 
ATGTTATTAG GGCAAGGCGG TCAAGAAGTT AAATTGAATA AAATGGCTTT TTTAGTCACC
GCACTCATCG CAATTATTAG CCATTTTATT GCGTTAAATA AGTTATTTAT TCATTTGTTC
ATAGGTAATA ATTTCACTTT AATTGAAATT TGCTCGTTAG TGAGTGCCAT GATTGCTGCT
ATTGCAACTG TTGCCATTTT GGCTCGAGTA AAAACACTTT GGTTTCTGTT GCCTATAGTT
TACTGTTTTT CTATTATCAA TTTAATTTTA CAAGCATTAT TACCTGAAAT TTGGGTTTAT
CATTTAAGTC AAAATACAAG TTTATTATTC CATATTGCCT TATCTTTATT TGCATATTCC
GTTTGTTTTA TTGCTATGTT GTATGCCATT CAATTACGCT GGATTGATAA TAGCTTAAAA
AGTAAAAAAT TAACTTTCTC GCCGGTTGTT CCTCCATTAA TGACCGTTGA AAAACATTTC
TTTCGCTCTT TGTTTAGCGG ACAAATATTA CTTACTTTGA CACTTATTTC CGGTAGCATT
CAATTAATTG ATTTTTTCTC CGCTCACAAT ATTCCCAAAG CTATCTTTTC ATTTTTAGCT
TGGTTTGTTT TCGGCATAGC GTTATTTGGA CATTGGAAAT TATATTGGCG AGGAAAAAGA
ATGATTATTT ATACAATTTC AGGTATGATC CTGCTCACTG TCGCTTATTT CGGCAGTCGT
GTTATTTTAG AGTTATAA
 
Protein sequence
MWFAVISAFF YLISILLIMP MLLGQGGQEV KLNKMAFLVT ALIAIISHFI ALNKLFIHLF 
IGNNFTLIEI CSLVSAMIAA IATVAILARV KTLWFLLPIV YCFSIINLIL QALLPEIWVY
HLSQNTSLLF HIALSLFAYS VCFIAMLYAI QLRWIDNSLK SKKLTFSPVV PPLMTVEKHF
FRSLFSGQIL LTLTLISGSI QLIDFFSAHN IPKAIFSFLA WFVFGIALFG HWKLYWRGKR
MIIYTISGMI LLTVAYFGSR VILEL