Gene HS_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1342 
SymboluraA 
ID4240854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1534360 
End bp1535601 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content41% 
IMG OID638104916 
Producturacil permease 
Protein accessionYP_719554 
Protein GI113461485 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00369344 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATC AAAATATCCC CGTAGAAATT TCGGGCAAAA TCAAACAAGC TTTTATTGGC 
TTGCAAATGT TATTCGTTGC ATTCGGTGCA TTGGTATTAG TTCCATTAAT CACGGGATTG
GACGCAAATA CTGCCTTATT AACCGCCGGA ATTGGTACAT TGCTTTTCCA ACTATGTACC
GGCAAGAAAG TGCCGATCTT TTTAGCCTCT TCTTTTGCTT TTATTGCACC AATCCAATAT
GGTGTAGCCT CATGGGGAAT TCCGGCAACA ATGGGCGGTC TTGCTTGTGC AGGACTTGTT
TATGTTGCCT TAAGCCTGTT GGTTAAATTA CGTGGAGCGG GGGCTTTACA GAAAATTTTT
CCTCCGGTTG TTGTTGGACC CGTTATTATC ATTATCGGAT TAGGACTGGC ACCTGTGGCT
GTAGATATGG CGACCGGCAA AGGCAGTAAC TATGAATATG GTGATGCGGT TCTCGTGTCA
ATGATTACGC TATTGACTAC TTTAATTGTG GCTGTTTTTG CCAAAGGTAT GATGAAATTA
ATACCGATAA TGTTTGGTAT TGCGGTGGGG TATATCTTGA GTTTATTTAT GGGATTAATC
GATTTTAGTC CTATTGCCAA AGCATCTTGG TTTTCCTTAC CGAATTTAAC GACACCAGAA
TTTAAACTGG AAGCCATCTT GTATTTGCTA CCAATAGCGA TTGCACCGGC AGTTGAACAT
ATTGGCGGTA TCATGGCTAT CAGTTCTGTA ACCGGCAAAG ATTTCTTAAA AAATCCGGGG
TTACACCGCA CTTTATTGGG TGATGGTCTT GCAACATCTG CCGCATCACT ATTAGGCGGC
CCACCAAATA CCACTTATGC AGAAGTAACA GGTGCAGTAA TGCTAACCCG AAATTTTAAT
CCGACTATTA TGACTTGGGC AGCAGTATGG GCAATTGCAA TTTCATTTTG CGGTAAAGTT
GGAGCATTCC TATCTACGAT CCCCACCTTC GTTATGGGCG GAATTATGAT GCTGGTTTTT
GGCTCTATTG CCGTCGTTGG GATGAGTACA TTAATTCGTG GGAAAGTTGA TGTGACGGAA
GCACGTAATT TATGTATTAT TTCTGTGGTT ATGACTTTTG GAATTGGTGG AATGTTTGTC
AATTTAGGAG AATTATCCTT GAAAGGGATT AGTTTATGTG CCGTTGTCGC TATTATTCTA
AATCTCATTT TACCATCGGC TAAAAATCAA ATAGAAGACT AA
 
Protein sequence
MTNQNIPVEI SGKIKQAFIG LQMLFVAFGA LVLVPLITGL DANTALLTAG IGTLLFQLCT 
GKKVPIFLAS SFAFIAPIQY GVASWGIPAT MGGLACAGLV YVALSLLVKL RGAGALQKIF
PPVVVGPVII IIGLGLAPVA VDMATGKGSN YEYGDAVLVS MITLLTTLIV AVFAKGMMKL
IPIMFGIAVG YILSLFMGLI DFSPIAKASW FSLPNLTTPE FKLEAILYLL PIAIAPAVEH
IGGIMAISSV TGKDFLKNPG LHRTLLGDGL ATSAASLLGG PPNTTYAEVT GAVMLTRNFN
PTIMTWAAVW AIAISFCGKV GAFLSTIPTF VMGGIMMLVF GSIAVVGMST LIRGKVDVTE
ARNLCIISVV MTFGIGGMFV NLGELSLKGI SLCAVVAIIL NLILPSAKNQ IED