| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1324 |
|---|
| Symbol | ligA |
|---|
| ID | 4240836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1514428 |
|---|
| End bp | 1515237 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638104898 |
|---|
| Product | DNA ligase |
|---|
| Protein accession | YP_719536 |
|---|
| Protein GI | 113461467 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTAT TAGCACTATT TTTTATGTTG TTCATTATAA AAGTTCAAGC AACATTGCCG
GATTTCATGC TGTTGGAAAA CTATAAAAAT CAGGATGTAA GCGGTTGGGT GATGAGTGAA
AAGTTGGATG GCATTAGGGG ATATTGGGAT GGCAAACAAC TTTTCACTCG ACAAAATAAA
GTCATTCAGC CACCGCACTA TTTTATTCGT GATTTCCCTC CCTTTGCTAT TGACGGCGAA
CTTTTTACCG AACGTAATCA ATTCGAAAAA ATATCCTCTA TTGTACGTTC CAAAAAAGAT
AAAGGTTGGG AAAAAATGAA ATTATATGTT TTTGATGTTC CCAATGCACA AGGAAATTTA
TTTGAAAGAC TGGCTGTTTT ACAAGATTAT CTTGATAAAC ATCCTACACC TTATATTCAA
ATTATTGAGC AAATTCCCAT TAAAACTAAA CAACAAGTGA AAAATTTTTT ACAACAGATT
GAAAAACAGC AAGGTGAGGG AGTTGTTTTA CGTAATCCTC ATGCTACCTA TGAACGAAAA
CGCAGTACAC AAATTTTGAA ATTAAAGACC GCACTTGATG AAGAATGTAC TGTTATAGCT
CATCATCAAG GTAAAGGACA ATTTGAAAAT ATGCTAGGCT CAATTAGCTG TCAAAATCAT
CGTGGCATTT TTAAAATCGG CTCAGGATTT AATTTAATTG AACGTAGAAA TCCACCTCCA
ATAGGCTCTA TTATTACCTA TAAATATCGT GGATTAACTA AAAATGGACT TCCTCGATTT
GCCACTTATT GGCGTTCAAA GAAAGAATAA
|
|---|
| Protein sequence | MRVLALFFML FIIKVQATLP DFMLLENYKN QDVSGWVMSE KLDGIRGYWD GKQLFTRQNK
VIQPPHYFIR DFPPFAIDGE LFTERNQFEK ISSIVRSKKD KGWEKMKLYV FDVPNAQGNL
FERLAVLQDY LDKHPTPYIQ IIEQIPIKTK QQVKNFLQQI EKQQGEGVVL RNPHATYERK
RSTQILKLKT ALDEECTVIA HHQGKGQFEN MLGSISCQNH RGIFKIGSGF NLIERRNPPP
IGSIITYKYR GLTKNGLPRF ATYWRSKKE
|
|---|
| |