Gene HS_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1315 
Symboltgt 
ID4240827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1505711 
End bp1506841 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content39% 
IMG OID638104889 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_719527 
Protein GI113461458 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCTTACATAA AACTAACGGT ATGGCACGTC GAGGTACCAT GACTTTTAAT 
CGTCCGCAGG GCGAATTTAC GGTGGAAACG CCAGCTTTTA TGCCGGTTGG AACCTATGGC
ACGGTAAAAG GCATGACACC TGAAGAAGTG CGGGTAACAG GGGCAGAAAT TTTACTGGGA
AATACCTTTC ATTTGTGGCT TCGCCCGGGT CAAGAAATTA TGCGTCAACA CGGTGATTTA
CACGATTTTA TGCAATGGCA TCGTCCAATT TTAACCGATA GTGGTGGTTT TCAAGTTTTT
AGCTTAGGTA AATTGCGTAA AATTACTGAA GAAGGTGTTA AATTTCAAAA TCCAATTAAT
GGCGAAAGAA TTTTCTTATC GCCGGAAAAA TCTATGGAAA TTCAATATGA TTTAGGTTCG
GACATCGTGA TGATTTTCGA TGAATGTACA CCTTATCCGG CAACTTTCGA TTATGCCAAA
AAATCCATGG AAATGTCTTT ACGTTGGGCA AAGCGTAGTC GTGAACGTTT TGATGAATTA
GGCAATAAAA ATGCCTTGTT CGGTATTGTA CAAGGCAGTA CTTTTGAAGA TTTACGTAAA
CTTTCTATTG AGGGGTTAAT TAATATCGGT TTTGACGGCT ATGCTGTTGG TGGATTAGCT
GTTGGAGAAC CTAAAGAAGA TATGCACAGA ATTTTAGCAT ATGTTTGCCC GCAACTTCCG
GCGGATAAAC CTCGTTATTT AATGGGTGTC GGTAAACCGG AAGATTTGGT TGAAGGTGTT
CGGCGTGGTA TTGATATGTT TGATTGCGTT ATGCCAACTC GTAATGCTCG TAACGGTCAT
CTTTTTGTCA GTAACGGTAT TGTAAAAATT CGTAATGCAA AATATCGTAA TGACACAACC
TCCCTCGATC CTGAATGTGA TTGCTATACC TGTAAACACT ATACCAAAGC TTATTTATAT
CATCTAGATA AGTGCGGTGA AATTTTGGGG GCGAGATTAA ATACCATTCA TAATCTTCAC
TATTATCAAC GTTTAATGGC TCAAATTCGT CAAGCGATTG AAGAAGATCG TTTTGAGGAT
TTTGTTGTAG AATTTTATAA AAAAATCGGT AAATCTGTGC CTACACGATA A
 
Protein sequence
MKFTLHKTNG MARRGTMTFN RPQGEFTVET PAFMPVGTYG TVKGMTPEEV RVTGAEILLG 
NTFHLWLRPG QEIMRQHGDL HDFMQWHRPI LTDSGGFQVF SLGKLRKITE EGVKFQNPIN
GERIFLSPEK SMEIQYDLGS DIVMIFDECT PYPATFDYAK KSMEMSLRWA KRSRERFDEL
GNKNALFGIV QGSTFEDLRK LSIEGLINIG FDGYAVGGLA VGEPKEDMHR ILAYVCPQLP
ADKPRYLMGV GKPEDLVEGV RRGIDMFDCV MPTRNARNGH LFVSNGIVKI RNAKYRNDTT
SLDPECDCYT CKHYTKAYLY HLDKCGEILG ARLNTIHNLH YYQRLMAQIR QAIEEDRFED
FVVEFYKKIG KSVPTR