| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1306 |
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| Symbol | frpB |
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| ID | 4240817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1494813 |
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| End bp | 1496891 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638104879 |
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| Product | iron-regulated outer membrane protein |
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| Protein accession | YP_719518 |
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| Protein GI | 113461449 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000656516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TTAAATTGCT GCCTATTCCC GCTCTAGTAT TTGGTGTGTT TGCCGCAAAT
ACATTTGCTC AAGCAGATAC TACAAGGTTA GACACCATCA ATGTTACGGA TCACCAAGGC
TTAAAAGTCA AAACCAATGT CGTGACCACC CAAATCAAAG ATGAAAGCAC TGAAACCGAT
TTACGTGGTT TATTGAAAAA CGAACCGTCC ATTGCCATAG GGGGGGGTAA CGGTACTTCT
CAATATCTCT ATATTCGTGG TATGGGACAA AATTCCATTG ATGTTAAAGT GGATAATGCG
TATTCTGATG CACAAATTCA CTACCATCAA GGTCGTCATA TGCTAGACCC TGCCATGGTC
AAAATTGTTG CTGTGCAAAA AGGGGCAGGT AGTGCATCAG CCGGTATCGG TCAAACCAAC
GGGGCGATTG TTGCCAAAAC CCTAGATGCC TTAGATTTAC TGGAAGGCAG TGATAAAAAC
TTCGGCGCAA GAGTCGGCAC AGGCTTCAGC ACCAATTACT CTCAAAATTA TAATGCCACC
GTATATGGAA AAAGCGGGAT GTTTGATGCG TTAATCGCAA CAAACTTTGT CAAAGACGGC
AATTACAAAG CCGGTAAAGG TTATTACGAT TCACTGAACA AGACCGATCG TGTTTTATAC
AGCGATTTAA ATAAACTCAG CTACCTTGCC AAAGTCGGGG CAACGGTTGG CGATCACCGT
TTCGTATTAA GTCATTTACA CGAACAACAT GAAGGCGATC GTTTGGTGCG TGAAGAGTTT
GTCAATTTTG ATCCAACCAG ACAAGCCCCC GCTGCACGCA AAATGACGGT CGATAACACC
AATTTAGAAT GGACAGGGAA AAACTTAGGC TTTGCCAAAG AAGCCACTGC CAATGTTTAT
CGTTTAGTAC ATGGTCGTTG GTCTGCCAAT GACAAAGGCA ATGGTTATGC CGGCAATAGA
GAAGGTGCCA CCCAAATCAA AGTGGTGACC CAAGGAGCAA ACGTCAATTT TGATTTACCG
GTTCATCACA ATGTACTCGT GAAATACGGT ATTAACTACC GCCATCAAGA ATCCAAACCG
CACTTTAAAG CCGCAGATAT CTCTAATCAA CGTAAATCAG ATACCGGTTT TTATGTCGAA
GCCATCACGT CAGCCACCGA CCAGCTTACG CTAACAACCG GGTTACGCTA TGATCAGTTT
ACCTTTAAAG CGATGGACGG CAAAAAAGTC AGTGATTCAA GTTTTAACCC GAGTATCGGC
GTGATTTTCG AAGCCACCCC TGAGCTAAGC TTTAGTGCGA GCCATAACTA CGCTACCCGT
AGCCCACGTA TGCAAGATGC CATTTTAAGT CATGGTCAAA ATCGTGGTTT AACCAGCATT
CTAGAAGGCA CCAAAGCCGA GCAAGCACGT ACCACCGAAA TCGGGTTTAA CTATGATAAC
GGCACATTCA GCGTGGACGG TAGCTATTTC TGGCAACGTA TCAAAGATGC CCTAGGCACA
ACCGCCGGCC GCGACAACCA TACTAGTGAT GGCACTTGGC AGAGCATCTT AAATGCTGGC
AAAATTAAAA ACCACGGTTA TGAATTGAAT TTCGGTTACC ATCAAGGTGG CTTTACCGCT
CGTCTTGGTG TCGCCGACAG CAAACCTCGC TTCTACACCA ATCTTGGCAA AAAAGCCAAA
AAAGGTGGCG GCATCGAAGA TAACAAACCA CTACTAAGCG GCAATCCTGA ATACGCTTCT
GCGATGGGTC GCACATGGAC GGCATCTGTA AGTTACCGTT TCGAGGAACC TAATATTGAA
ATCGGTTTAC ATCACCGCCT TGTTGAAAAA GTCAAAGCTA AAGACGACTT CTTACTGGTA
GGGGGTAACG TTACGCCGGG TAAAGGCAAA CCTGGTTATA ATGTAACTGA CCTGACAATC
AACTGGAAAC CGTTTAACGA TGACAGCATG AATGTCAACT TTGCAATTGA TAATATTATG
AACAAGCATT ACAAATCGCA TGCACAACGT GGAGGAAATG CTAACACGCT TCCAGCACGT
GGTCATGAAT TCCGCTTGGG TGTAAATTAT AAATTCTAG
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| Protein sequence | MKKFKLLPIP ALVFGVFAAN TFAQADTTRL DTINVTDHQG LKVKTNVVTT QIKDESTETD
LRGLLKNEPS IAIGGGNGTS QYLYIRGMGQ NSIDVKVDNA YSDAQIHYHQ GRHMLDPAMV
KIVAVQKGAG SASAGIGQTN GAIVAKTLDA LDLLEGSDKN FGARVGTGFS TNYSQNYNAT
VYGKSGMFDA LIATNFVKDG NYKAGKGYYD SLNKTDRVLY SDLNKLSYLA KVGATVGDHR
FVLSHLHEQH EGDRLVREEF VNFDPTRQAP AARKMTVDNT NLEWTGKNLG FAKEATANVY
RLVHGRWSAN DKGNGYAGNR EGATQIKVVT QGANVNFDLP VHHNVLVKYG INYRHQESKP
HFKAADISNQ RKSDTGFYVE AITSATDQLT LTTGLRYDQF TFKAMDGKKV SDSSFNPSIG
VIFEATPELS FSASHNYATR SPRMQDAILS HGQNRGLTSI LEGTKAEQAR TTEIGFNYDN
GTFSVDGSYF WQRIKDALGT TAGRDNHTSD GTWQSILNAG KIKNHGYELN FGYHQGGFTA
RLGVADSKPR FYTNLGKKAK KGGGIEDNKP LLSGNPEYAS AMGRTWTASV SYRFEEPNIE
IGLHHRLVEK VKAKDDFLLV GGNVTPGKGK PGYNVTDLTI NWKPFNDDSM NVNFAIDNIM
NKHYKSHAQR GGNANTLPAR GHEFRLGVNY KF
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