Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1302 |
Symbol | |
ID | 4240813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1489174 |
End bp | 1491093 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104875 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_719514 |
Protein GI | 113461445 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTTT TTACAAATTT AACTTTAAAG CGTGGAAATA CCTTACTCTT AGAAAATACC TGTGCCACTA TTAACCCCGG TCAAAAAGTT GGCTTAGTCG GAAAAAACGG TTGTGGTAAA TCTTCTTTAT TTGCACTACT CAAAAAAGAA ATGAGTGCGG AAGAAGGTGA TATAACTTTT CCAAATCACT GGGCAATGGC TTGGGTAAAT CAAGAAACAC CTGCCTTAGA AATAAGTGCG TTAGATTATG TTATCAAAGG CGATCGTGAA TATTGCAAAT TACAAAAGGC CTTAGCAACT GCTACCGAAA ATAATCATGG CAATGATATT GCCCGTATTC ATGCACAATT AGACACAATT GATGCTTGGA CAATTCAAGC GAGAGCGGCT TCTCTTTTAC ATGGATTGGG GTTTTCTCAA GAGGATTTAA CAAGAACGGT TAAATCTTTC TCGGGCGGTT GGCGTATGCG TCTTAACCTT GCACAAGCCC TGCTTTGTCG CTCTGATTTA CTCTTATTAG ACGAACCGAC AAACCATTTA GACTTAGATG CTGTCATTTG GTTAGAACGT TGGTTAATTC AATATCAAGG CACCTTGATT TTAATTTCAC ATGACCGTGA TTTTCTTGAT CCTATTGTGA ATAAGATCAT TCATATTGAA CAACATAAAC TGCATGAATA CAGTGGCAAT TATTCTTCCT TTGAAGTGCA ACGTGCAACA AAATTAGCAC AACAAACCGC ACTTTATCGC CAACAGCAAC AAAAAATAAA CCATCTACAA AAATATATCG ATCGCTTTAA AGCCAAAGCA ACTAAAGCCA AACAAGCACA AAGTCGAGTC AAAGCCTTAG AACGAATGGA ACTTATTGCA CCTGCTTATG TAGATAATCC TTTTACCTTT AAATTTCGTG AACCGCTCGC TTTACCCAAT CCCTTGGTTT CCATTGAAAA AGCCAGTGCA GGTTATAACA ATGGAGAAAG TACGGTGGAA ATTTTACAAA AAATTAAGCT CAATTTAGTA CCAGGATCTC GTATCGGGTT GCTCGGTAAA AATGGTGCGG GCAAATCTAC GTTAATTAAA TTATTGGCAG GAGAATTGAC CGCACTTTCC GGCCACATCC AATTAGCAAA AGGCGTACAA TTAGGGTACT TTGCACAGCA TCAATTGGAT ACGCTACGTT CGGAAGAAAA CGCACTCTGG CATATGCAAA AAATTGCTCC CCAACAAACA GAACAACAAT TACGTGATTA CTTGGGCAGT TTTGCGTTCC ATGGCGACAA AGTAAATCAA GCCGTTTCTT CTTTTTCCGG CGGTGAAAAA GCCCGCTTGG TTCTAGCAAT TATTGTTTGG CAACGTCCAA ATTTACTCCT GTTGGACGAA CCGACCAACC ATTTAGATTT AGACATGCGT CAAGCCTTGA CAGAAGCATT AATAGATTAT CAAGGTTCAT TAATCGTGGT TTCCCACGAT CGCCATTTAC TGCGTAATAC AGTAGAAGAA TTTTATTTGG TTCATGATAA ACAAGTTGAG GAATTTACAG GCGATTTAGA AGACTATCAA AAATGGCTAA ATGAAATTAA TAGCACGCCG AAGCACAACG AAAAAATCAT CAATAATAAC GAAAACACCG GTAATCATCG CAAAGAACAA AAAAGAAAAG AAGCTGAACT GCGTCAACGG AGTGCACCAT TACGAAAAGA AATTGCCGAT ATTGAACGCA AAATGCAAAT ATATCAACAA AAACTACAAG AAATTGAATT ACTTCTTTCC GATACAGTGC TTTATCAGAC AGAAAATAAA GCAAAACTCA CCGCACTTTT AAATGAACAG GTTCAGCTTA AAAAAGCACT TGAAGATATA GAAATTTCAT GGTTCACAAT GCAAGAAGCA TTAGAAAATT TGATTAATAA TATAGAATAA
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Protein sequence | MILFTNLTLK RGNTLLLENT CATINPGQKV GLVGKNGCGK SSLFALLKKE MSAEEGDITF PNHWAMAWVN QETPALEISA LDYVIKGDRE YCKLQKALAT ATENNHGNDI ARIHAQLDTI DAWTIQARAA SLLHGLGFSQ EDLTRTVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL DLDAVIWLER WLIQYQGTLI LISHDRDFLD PIVNKIIHIE QHKLHEYSGN YSSFEVQRAT KLAQQTALYR QQQQKINHLQ KYIDRFKAKA TKAKQAQSRV KALERMELIA PAYVDNPFTF KFREPLALPN PLVSIEKASA GYNNGESTVE ILQKIKLNLV PGSRIGLLGK NGAGKSTLIK LLAGELTALS GHIQLAKGVQ LGYFAQHQLD TLRSEENALW HMQKIAPQQT EQQLRDYLGS FAFHGDKVNQ AVSSFSGGEK ARLVLAIIVW QRPNLLLLDE PTNHLDLDMR QALTEALIDY QGSLIVVSHD RHLLRNTVEE FYLVHDKQVE EFTGDLEDYQ KWLNEINSTP KHNEKIINNN ENTGNHRKEQ KRKEAELRQR SAPLRKEIAD IERKMQIYQQ KLQEIELLLS DTVLYQTENK AKLTALLNEQ VQLKKALEDI EISWFTMQEA LENLINNIE
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