Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1299 |
Symbol | xerC |
ID | 4240810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1486210 |
End bp | 1487085 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104872 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_719511 |
Protein GI | 113461442 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAAAAT ATTACAATTA TTTACGCATT GAACGACAAC TCAGTCCATA TACTCTCATA AATTATCAGC GTCAGTTGGA AAAAATTGTA GTGATTTTAC AACAAAACGA TATTCAATCT TGGCAGCAAG TAACACCAAG TGTTGTTCGT TTTGTATTAG CACAAAGTCG CAAAGAAGGA TTACATGAAA GAAGTTTAGC GTTGCGTTTA TCTGCTTTAC GACAATTTCT AAATTATTTG GTTGTACAAG GTGAATTAAA AGTTAATTCA GCCGTTGGTA TTTCTGCACC TAAGCAAAGT AAATATTTAC CGAAAAATAT GGATATGGAA CAGGTGCAAC AATTATTGAC TAATGAAAGC AAAGAACCCA TCGATCTTCG TGATAAAGCG ATGATGGAGT TGATGTACAG TTCAGGTTTG CGTTTATCAG AATTACAAAG TTTGAATTTG AATAGTATTA ATATTCGCTC TCGAGAAGTG CGTGTTATCG GGAAAGGAAA TAAAGAGCGG ATTTTACCCT TTGGACGTTA TGCTTCTCAG GCTATTCAAC AATGGCTGAA AGTGCGGTTG TTATTTAATC CGAAAGATGA GGCGTTGTTT GTCAGTCAAT TAGGCAATCG TATTTCTCAT CGTTCCATTC AAAAACGTAT GGAAACTTGG GGTATTCGAC AAGGCTTAAA CGGTCATCTC AACCCACATA AATTACGCCA TTCTTTTGCT ACCCATATGC TGGAAAACAG CTCGGATCTA CGTGCGGTAC AAGAATTATT AGGGCATAGT AACTTATCCA CAACCCAGAT TTATACCCAC TTGGATTTTC AACACTTGGC ACAAGTTTAC GACAAAGCAC ACCCTCGAGC CAAACGTAAA AAATAG
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Protein sequence | MQKYYNYLRI ERQLSPYTLI NYQRQLEKIV VILQQNDIQS WQQVTPSVVR FVLAQSRKEG LHERSLALRL SALRQFLNYL VVQGELKVNS AVGISAPKQS KYLPKNMDME QVQQLLTNES KEPIDLRDKA MMELMYSSGL RLSELQSLNL NSINIRSREV RVIGKGNKER ILPFGRYASQ AIQQWLKVRL LFNPKDEALF VSQLGNRISH RSIQKRMETW GIRQGLNGHL NPHKLRHSFA THMLENSSDL RAVQELLGHS NLSTTQIYTH LDFQHLAQVY DKAHPRAKRK K
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