Gene HS_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1292 
Symbolrph 
ID4240803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1480384 
End bp1481100 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID638104865 
Productribonuclease PH 
Protein accessionYP_719504 
Protein GI113461435 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0523013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCAA ATGCGAGAGC AATCAATCAA CCCCGTCCAA TAAAAATTAC TCGTCATTAC 
ACTAAACATG CTGAAGGTTC GGTATTAGTT GAATTCGGTG AAACTAAAGT GATTTGTACA
GCGACGGTTG AAGATAGTGT ACCACGTTTT TTAAAAGGGC AAGGAAAAGG TTGGGTTACT
GCAGAATATG GTATGCTTCC ACGCTCAACC CATAGCCGTA TGCAACGTGA AGCGGCTAAG
GGTAAACAAG GCGGTAGAAC GATGGAAATT CAACGTTTAA TTGCACGCTC ATTACGTGCT
ATGGTAGATT TGGAAGCTTT AGGTGAGCGT GCAATCACAT TGGACTGCGA TGTTATTCAA
GCGGACGGAG GTACGAGAAC AGCATCAATC ACGGGGGCTT GTGTAGCTTT AATTGATGCA
ATTAATTTTT TGCTGAAAAA CGGTACGTTG ACAACTAATC CGATAAAGGG ATTAGTTGCC
GCCATTTCCG TTGGTATTGT CAACGGTGAA ACGGTGTGTG ATTTAGAATA TGTGGAAGAT
AGCATTGCCG AAACAGATAT GAATGTGGTG ATGATGGAAG ATGGCCGTAT GATTGAAGTA
CAAGGAACAG CAGAGGGTGA ACCGTTTAGC CATGCAGAAC TTCTTACCCT ATTAGATTTA
GCCAAACAAG GTTGTGAACA ACTTTTTGTG GCACAACGTG TTGCATTAGC GGAATAA
 
Protein sequence
MRPNARAINQ PRPIKITRHY TKHAEGSVLV EFGETKVICT ATVEDSVPRF LKGQGKGWVT 
AEYGMLPRST HSRMQREAAK GKQGGRTMEI QRLIARSLRA MVDLEALGER AITLDCDVIQ
ADGGTRTASI TGACVALIDA INFLLKNGTL TTNPIKGLVA AISVGIVNGE TVCDLEYVED
SIAETDMNVV MMEDGRMIEV QGTAEGEPFS HAELLTLLDL AKQGCEQLFV AQRVALAE