Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1279 |
Symbol | frdC |
ID | 4240790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1467977 |
End bp | 1468381 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638104852 |
Product | fumarate reductase subunit C |
Protein accession | YP_719491 |
Protein GI | 113461422 |
COG category | [C] Energy production and conversion |
COG ID | [COG3029] Fumarate reductase subunit C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000508075 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACAG TAACAAGTAA ACGCAGAAGA TATGTGCGGG AAGTAAAAGC AACTTGGTGG AAAAAGCTAG ATTTTTACAA ACTTTACATT ATGCGTGAAG CAACAGCAAT TCCATCATTA TGGTTTAGCT TGGTATTACT TTATGGCGTG ATCTGCCTAG GTCAAAAAGA TGGATTACAA TCGGATTTTA TTCCTTTCTT ACAAAATCCA ATTGTTATTA TTCTGAATAT TATCGCCTTG GCAGCAGCCA TTTTGAATAC AGTTACGTAT TTCTTCATGA CGCCAAAAGT GCTAAATATC GTGTACAAAA ATGAAAAACT AAATCCGAAT GTTATTACTA TCGGTATGTG GGCTGTTACA GCCGTAGTAA GTATTCTTGC TTTAGTGCTA ATTTACTTGA AATAG
|
Protein sequence | MTTVTSKRRR YVREVKATWW KKLDFYKLYI MREATAIPSL WFSLVLLYGV ICLGQKDGLQ SDFIPFLQNP IVIILNIIAL AAAILNTVTY FFMTPKVLNI VYKNEKLNPN VITIGMWAVT AVVSILALVL IYLK
|
| |