Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1265 |
Symbol | ompW |
ID | 4240776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1450879 |
End bp | 1451508 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104838 |
Product | outer membrane protein precursor |
Protein accession | YP_719477 |
Protein GI | 113461408 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000128049 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAGCATTAGT ACTTAGCGTG GCGGCTGCAT TGGTGGCAGG AAGTGCAACA GCACATGAAG CAGGCAGTTT TATTGTTCGG GGTGGTCCTA TTTTAGTGGT GCCGAAAACA TCAACAAATA GTGATACGTT TAAGTTTGAT GTAAACAAAA ATGCCCAATT GGGGTTGACC GGAACCTATA TGATGACAGA TAACTTCGGG GTTGAGTTAT TAGCCGCAAC ACCGTTTCAT CATAAAATTA CATTAGGTAG TACCTTAGTA GGTAAAACAA AACATTTACC GCCAAGCCTA TATTTACAAT ATTATTTCTT AAACAAAGAT TCTAAAGCAC GTCCTTATAT TGGTGCCGGT GTGAACTATA CTAAATTCTT TGGTGAAAAA GCGATAATGG CTGGTGTTTC TGATCTTAAA TTAAAAGATT CTTGGGGAGC TGCATTTAAC GCAGGGGTAG ATATTCAATT GTCCGATAAT CTTTATTTAA ATACCGCTGT TTGGTATGCG AAAATTAAAA CAAAAGCAAG TTTTAAAATG AATGGTGGTG TTCAACAACC TCAACAACAT AAAGTCGATG TAACCCTTGA CCCAATGGTA TTTTTCATCG GTTTAGGTTG GAAATTCTAA
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Protein sequence | MKKTALVLSV AAALVAGSAT AHEAGSFIVR GGPILVVPKT STNSDTFKFD VNKNAQLGLT GTYMMTDNFG VELLAATPFH HKITLGSTLV GKTKHLPPSL YLQYYFLNKD SKARPYIGAG VNYTKFFGEK AIMAGVSDLK LKDSWGAAFN AGVDIQLSDN LYLNTAVWYA KIKTKASFKM NGGVQQPQQH KVDVTLDPMV FFIGLGWKF
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