Gene HS_1265 details

Gene Information

• Locus tag: HS_1265
• Symbol: ompW
• ID: 4240776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1450879
• End bp: 1451508
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638104838
• Product: outer membrane protein precursor
• Protein accession: YP_719477
• Protein GI: 113461408
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000128049
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CAGCATTAGT ACTTAGCGTG GCGGCTGCAT TGGTGGCAGG AAGTGCAACA 
GCACATGAAG CAGGCAGTTT TATTGTTCGG GGTGGTCCTA TTTTAGTGGT GCCGAAAACA 
TCAACAAATA GTGATACGTT TAAGTTTGAT GTAAACAAAA ATGCCCAATT GGGGTTGACC 
GGAACCTATA TGATGACAGA TAACTTCGGG GTTGAGTTAT TAGCCGCAAC ACCGTTTCAT 
CATAAAATTA CATTAGGTAG TACCTTAGTA GGTAAAACAA AACATTTACC GCCAAGCCTA 
TATTTACAAT ATTATTTCTT AAACAAAGAT TCTAAAGCAC GTCCTTATAT TGGTGCCGGT 
GTGAACTATA CTAAATTCTT TGGTGAAAAA GCGATAATGG CTGGTGTTTC TGATCTTAAA 
TTAAAAGATT CTTGGGGAGC TGCATTTAAC GCAGGGGTAG ATATTCAATT GTCCGATAAT 
CTTTATTTAA ATACCGCTGT TTGGTATGCG AAAATTAAAA CAAAAGCAAG TTTTAAAATG 
AATGGTGGTG TTCAACAACC TCAACAACAT AAAGTCGATG TAACCCTTGA CCCAATGGTA 
TTTTTCATCG GTTTAGGTTG GAAATTCTAA 

 

Protein sequence

MKKTALVLSV AAALVAGSAT AHEAGSFIVR GGPILVVPKT STNSDTFKFD VNKNAQLGLT 
GTYMMTDNFG VELLAATPFH HKITLGSTLV GKTKHLPPSL YLQYYFLNKD SKARPYIGAG 
VNYTKFFGEK AIMAGVSDLK LKDSWGAAFN AGVDIQLSDN LYLNTAVWYA KIKTKASFKM 
NGGVQQPQQH KVDVTLDPMV FFIGLGWKF