Gene HS_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1241 
SymbollepB 
ID4240752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1421035 
End bp1422066 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content37% 
IMG OID638104814 
Productsignal peptidase I 
Protein accessionYP_719453 
Protein GI113461384 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.824327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT CAAATTTATT TTTCGTTATA TTAATTGCAG CGGGATATGC CATTTGGAAA 
TTGCTTGATC ATTTGGCACT ACCGAATACA TTCAATATTT TATTAATTTT ATTGACCGCA
CTTTGTGGTG TTTTATGGTG CTATAACCGT TTTGTTATCT TGCCCAAGCG GAGCAGACAA
ATTGCTCGTG CAGAGCAGCG TAGCGGTAAA ATATTAACGG ATGAAGAAAA AAGTAAAATT
GAGCCGATTT CTGAGGGGAG TGAATTGTTA GCTTCCCTAT TTCCTGTATT GACTTTCGTA
CTTATTTTAC GTTCTTTTCT TTTTGAACCG TTTCAAATTC CATCTGTTTC TATGGAGCCA
ACCTTGCGTG TCGGGGATTT TTTGTTGGTC AAAAAATATG CCTATGGCAT TAAAGATCCG
ATTTTTCAAA ACACACTTAT TGAAACGGGA AAGCCGCAAC GTGGTGATAT AATTGTCTTT
AAAGCACCTT TAGAACCAAA TATTGATTAT ATTAAGAGAA TAGTTGGAAT ATCCGGAGAT
CGTGTTTTTT ATGATGAAAA AACGCGTCAT GTGACAATTA TTTATAATAA GGACGGCAAA
GAATGTGTTT ATGATTGTCA AATAAAGGAA TTTAGTTACA GCGAGCCACA GCGTAATCCT
GAATTTACTA TGATCGTTGG TAAGGATGCA CAAGGAAAAG CTATCTATGG CGATGAAAAT
CCTTTGGTCT TAACTGAGAA AGGCGATGTG GAACATCAAA TTCATTGGGA TCCACGCATT
TTTAACCGCA CTTATATGTA CAGTGGTTAC CGTCAGCAAA AAGATTACGT AACCGAATGG
ATTGTACCAG AGGGGCAATA TTTTGTGTTG GGTGACAACC GAGATCAGAG TGCAGATGGT
CGTTTTTGGG GTTTCGTTCC GGAAAAAAAT ATTGTGGGTA AAGCTGAATT TATTTGGTTG
AGTCTTGATA AAAAACAAGA TGAATTTCCA AAAGGCATTC GTTTCTCAAG AATGTTTACC
TCAATTAAAT GA
 
Protein sequence
MSKSNLFFVI LIAAGYAIWK LLDHLALPNT FNILLILLTA LCGVLWCYNR FVILPKRSRQ 
IARAEQRSGK ILTDEEKSKI EPISEGSELL ASLFPVLTFV LILRSFLFEP FQIPSVSMEP
TLRVGDFLLV KKYAYGIKDP IFQNTLIETG KPQRGDIIVF KAPLEPNIDY IKRIVGISGD
RVFYDEKTRH VTIIYNKDGK ECVYDCQIKE FSYSEPQRNP EFTMIVGKDA QGKAIYGDEN
PLVLTEKGDV EHQIHWDPRI FNRTYMYSGY RQQKDYVTEW IVPEGQYFVL GDNRDQSADG
RFWGFVPEKN IVGKAEFIWL SLDKKQDEFP KGIRFSRMFT SIK